Gene : Sobic.009G203000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR14255:SF4 - ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN Genomic Order:  2097
Name:  ? Sobic.009G203000 Secondary Identifier:  ? PAC:37920380
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G203000 0.5kb upstream 0.5kb upstream 5807 true Chr09: 55189840-55195646 Sorghum bicolor
Sobic.009G203000 0.5kb upstream 0.5kb upstream 500 false Chr09: 55189840-55190339 Sorghum bicolor
Sobic.009G203000 0.5kb downstream 0.5kb downstream 5807 true Chr09: 55190340-55196146 Sorghum bicolor
Sobic.009G203000 0.5kb downstream 0.5kb downstream 500 false Chr09: 55195647-55196146 Sorghum bicolor
Sobic.009G203000 1.0kb upstream 1.0kb upstream 6307 true Chr09: 55189340-55195646 Sorghum bicolor
Sobic.009G203000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 55189340-55190339 Sorghum bicolor
Sobic.009G203000 1.0kb downstream 1.0kb downstream 6307 true Chr09: 55190340-55196646 Sorghum bicolor
Sobic.009G203000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 55195647-55196646 Sorghum bicolor
Sobic.009G203000 2.0kb upstream 2.0kb upstream 7307 true Chr09: 55188340-55195646 Sorghum bicolor
Sobic.009G203000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 55188340-55190339 Sorghum bicolor
Sobic.009G203000 2.0kb downstream 2.0kb downstream 7307 true Chr09: 55190340-55197646 Sorghum bicolor
Sobic.009G203000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 55195647-55197646 Sorghum bicolor
Sobic.009G203000 5.0kb upstream 5.0kb upstream 10307 true Chr09: 55185340-55195646 Sorghum bicolor
Sobic.009G203000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 55185340-55190339 Sorghum bicolor
Sobic.009G203000 5.0kb downstream 5.0kb downstream 10307 true Chr09: 55190340-55200646 Sorghum bicolor
Sobic.009G203000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 55195647-55200646 Sorghum bicolor
Sobic.009G203000 10.0kb upstream 10.0kb upstream 15307 true Chr09: 55180340-55195646 Sorghum bicolor
Sobic.009G203000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 55180340-55190339 Sorghum bicolor
Sobic.009G203000 10.0kb downstream 10.0kb downstream 15307 true Chr09: 55190340-55205646 Sorghum bicolor
Sobic.009G203000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 55195647-55205646 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177481 5267 Panicoideae View MSA
124587151 5269 Grass View MSA
122043636 5273 Angiosperm View MSA
121351486 5274 Embryophyte View MSA
123427639 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.005        
cufflinks 3.859       Low
cufflinks 5.692        
cufflinks 5.702        
cufflinks 10.608        
cufflinks 4.422       Low
cufflinks 8.916        
cufflinks 6.572        
cufflinks 8.212        
cufflinks 7.337        
cufflinks 7.028        
cufflinks 8.439        
cufflinks 6.223        
cufflinks 7.097        
cufflinks 8.083        
cufflinks 5.705        
cufflinks 9.152        
cufflinks 9.118        
cufflinks 5.047        
cufflinks 11.03       High
cufflinks 19.031     High High
cufflinks 8.438        
cufflinks 8.449        
cufflinks 8.945        
cufflinks 5.361        
cufflinks 6.373     High  
cufflinks 7.678        
cufflinks 13.165     High High
cufflinks 6.569        
cufflinks 8.146        

0 Strain