Gene : Sobic.004G290000 S. bicolor v3.1.1
Defline:  (1 of 1) K01280 - tripeptidyl-peptidase II [EC:3.4.14.10] (TPP2) Genomic Order:  3040
Name:  ? Sobic.004G290000 Secondary Identifier:  ? PAC:37932683
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G290000 0.5kb upstream 0.5kb upstream 19240 true Chr04: 63093935-63113174 Sorghum bicolor
Sobic.004G290000 0.5kb upstream 0.5kb upstream 500 false Chr04: 63112675-63113174 Sorghum bicolor
Sobic.004G290000 0.5kb downstream 0.5kb downstream 19240 true Chr04: 63093435-63112674 Sorghum bicolor
Sobic.004G290000 0.5kb downstream 0.5kb downstream 500 false Chr04: 63093435-63093934 Sorghum bicolor
Sobic.004G290000 1.0kb upstream 1.0kb upstream 19740 true Chr04: 63093935-63113674 Sorghum bicolor
Sobic.004G290000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 63112675-63113674 Sorghum bicolor
Sobic.004G290000 1.0kb downstream 1.0kb downstream 19740 true Chr04: 63092935-63112674 Sorghum bicolor
Sobic.004G290000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 63092935-63093934 Sorghum bicolor
Sobic.004G290000 2.0kb upstream 2.0kb upstream 20740 true Chr04: 63093935-63114674 Sorghum bicolor
Sobic.004G290000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 63112675-63114674 Sorghum bicolor
Sobic.004G290000 2.0kb downstream 2.0kb downstream 20740 true Chr04: 63091935-63112674 Sorghum bicolor
Sobic.004G290000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 63091935-63093934 Sorghum bicolor
Sobic.004G290000 5.0kb upstream 5.0kb upstream 23740 true Chr04: 63093935-63117674 Sorghum bicolor
Sobic.004G290000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 63112675-63117674 Sorghum bicolor
Sobic.004G290000 5.0kb downstream 5.0kb downstream 23740 true Chr04: 63088935-63112674 Sorghum bicolor
Sobic.004G290000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 63088935-63093934 Sorghum bicolor
Sobic.004G290000 10.0kb upstream 10.0kb upstream 28740 true Chr04: 63093935-63122674 Sorghum bicolor
Sobic.004G290000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 63112675-63122674 Sorghum bicolor
Sobic.004G290000 10.0kb downstream 10.0kb downstream 28740 true Chr04: 63083935-63112674 Sorghum bicolor
Sobic.004G290000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 63083935-63093934 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183553 5267 Panicoideae View MSA
124580362 5269 Grass View MSA
122045900 5273 Angiosperm View MSA
121344664 5274 Embryophyte View MSA
123424480 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.961       Low
cufflinks 4.479        
cufflinks 5.609        
cufflinks 5.258        
cufflinks 8.584        
cufflinks 4.547        
cufflinks 8.21        
cufflinks 7.81        
cufflinks 7.554        
cufflinks 7.874        
cufflinks 15.143     High High
cufflinks 15.016     High High
cufflinks 5.943        
cufflinks 12.003     High  
cufflinks 6.405        
cufflinks 4.094        
cufflinks 7.449        
cufflinks 8.946        
cufflinks 3.412       Low
cufflinks 6.354        
cufflinks 12.864        
cufflinks 14.496     High High
cufflinks 13.927     High  
cufflinks 14.531     High High
cufflinks 4.114        
cufflinks 3.885       Low
cufflinks 17.554     High High
cufflinks 1.396       Low
cufflinks 13.245     High  
cufflinks 9.363        

0 Strain