Gene : Sobic.009G206500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11972//PTHR11972:SF66 - NADPH OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  2135
Name:  ? Sobic.009G206500 Secondary Identifier:  ? PAC:37921435
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G206500 0.5kb upstream 0.5kb upstream 10311 true Chr09: 55438002-55448312 Sorghum bicolor
Sobic.009G206500 0.5kb upstream 0.5kb upstream 500 false Chr09: 55447813-55448312 Sorghum bicolor
Sobic.009G206500 0.5kb downstream 0.5kb downstream 10311 true Chr09: 55437502-55447812 Sorghum bicolor
Sobic.009G206500 0.5kb downstream 0.5kb downstream 500 false Chr09: 55437502-55438001 Sorghum bicolor
Sobic.009G206500 1.0kb upstream 1.0kb upstream 10811 true Chr09: 55438002-55448812 Sorghum bicolor
Sobic.009G206500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 55447813-55448812 Sorghum bicolor
Sobic.009G206500 1.0kb downstream 1.0kb downstream 10811 true Chr09: 55437002-55447812 Sorghum bicolor
Sobic.009G206500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 55437002-55438001 Sorghum bicolor
Sobic.009G206500 2.0kb upstream 2.0kb upstream 11811 true Chr09: 55438002-55449812 Sorghum bicolor
Sobic.009G206500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 55447813-55449812 Sorghum bicolor
Sobic.009G206500 2.0kb downstream 2.0kb downstream 11811 true Chr09: 55436002-55447812 Sorghum bicolor
Sobic.009G206500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 55436002-55438001 Sorghum bicolor
Sobic.009G206500 5.0kb upstream 5.0kb upstream 14811 true Chr09: 55438002-55452812 Sorghum bicolor
Sobic.009G206500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 55447813-55452812 Sorghum bicolor
Sobic.009G206500 5.0kb downstream 5.0kb downstream 14811 true Chr09: 55433002-55447812 Sorghum bicolor
Sobic.009G206500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 55433002-55438001 Sorghum bicolor
Sobic.009G206500 10.0kb upstream 10.0kb upstream 19811 true Chr09: 55438002-55457812 Sorghum bicolor
Sobic.009G206500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 55447813-55457812 Sorghum bicolor
Sobic.009G206500 10.0kb downstream 10.0kb downstream 19811 true Chr09: 55428002-55447812 Sorghum bicolor
Sobic.009G206500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 55428002-55438001 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180264 5267 Panicoideae View MSA
124574970 5269 Grass View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.564        
cufflinks 0.621       Low
cufflinks 0.461       Low
cufflinks 1.339       Low
cufflinks 23.237     High  
cufflinks 1.384       Low
cufflinks 10.334        
cufflinks 9.612     High  
cufflinks 2.958        
cufflinks 3.557        
cufflinks 27.837     High  
cufflinks 24.226     High  
cufflinks 15.401     High  
cufflinks 23.151     High  
cufflinks 12.664     High  
cufflinks 0.797       Low
cufflinks 11.453     High  
cufflinks 10.82        
cufflinks 4.234        
cufflinks 11.304        
cufflinks 12.161        
cufflinks 21.564     High  
cufflinks 24.615     High  
cufflinks 23.377     High  
cufflinks 0.943       Low
cufflinks 1.884       Low
cufflinks 14.332     High  
cufflinks 1.098       Low
cufflinks 23.553     High  
cufflinks 12.624     High  

0 Strain