Gene : Sobic.004G287400 S. bicolor v3.1.1
Defline:  (1 of 6) PF00924 - Mechanosensitive ion channel (MS_channel) Genomic Order:  3014
Name:  ? Sobic.004G287400 Secondary Identifier:  ? PAC:37930857
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G287400 0.5kb upstream 0.5kb upstream 4754 true Chr04: 62949914-62954667 Sorghum bicolor
Sobic.004G287400 0.5kb upstream 0.5kb upstream 500 false Chr04: 62954168-62954667 Sorghum bicolor
Sobic.004G287400 0.5kb downstream 0.5kb downstream 4754 true Chr04: 62949414-62954167 Sorghum bicolor
Sobic.004G287400 0.5kb downstream 0.5kb downstream 500 false Chr04: 62949414-62949913 Sorghum bicolor
Sobic.004G287400 1.0kb upstream 1.0kb upstream 5254 true Chr04: 62949914-62955167 Sorghum bicolor
Sobic.004G287400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 62954168-62955167 Sorghum bicolor
Sobic.004G287400 1.0kb downstream 1.0kb downstream 5254 true Chr04: 62948914-62954167 Sorghum bicolor
Sobic.004G287400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 62948914-62949913 Sorghum bicolor
Sobic.004G287400 2.0kb upstream 2.0kb upstream 6254 true Chr04: 62949914-62956167 Sorghum bicolor
Sobic.004G287400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 62954168-62956167 Sorghum bicolor
Sobic.004G287400 2.0kb downstream 2.0kb downstream 6254 true Chr04: 62947914-62954167 Sorghum bicolor
Sobic.004G287400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 62947914-62949913 Sorghum bicolor
Sobic.004G287400 5.0kb upstream 5.0kb upstream 9254 true Chr04: 62949914-62959167 Sorghum bicolor
Sobic.004G287400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 62954168-62959167 Sorghum bicolor
Sobic.004G287400 5.0kb downstream 5.0kb downstream 9254 true Chr04: 62944914-62954167 Sorghum bicolor
Sobic.004G287400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 62944914-62949913 Sorghum bicolor
Sobic.004G287400 10.0kb upstream 10.0kb upstream 14254 true Chr04: 62949914-62964167 Sorghum bicolor
Sobic.004G287400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 62954168-62964167 Sorghum bicolor
Sobic.004G287400 10.0kb downstream 10.0kb downstream 14254 true Chr04: 62939914-62954167 Sorghum bicolor
Sobic.004G287400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 62939914-62949913 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187663 5267 Panicoideae View MSA
124578867 5269 Grass View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.375        
cufflinks 2.389        
cufflinks 5.606        
cufflinks 5.972        
cufflinks 77.331     High High
cufflinks 5.773        
cufflinks 3.866        
cufflinks 1.218       Low
cufflinks 1.546       Low
cufflinks 4.362        
cufflinks 5.034        
cufflinks 3.09        
cufflinks 7.1        
cufflinks 4.121        
cufflinks 14.31     High  
cufflinks 3.292        
cufflinks 4.023        
cufflinks 3.332        
cufflinks 3.304        
cufflinks 4.534        
cufflinks 21.573     High High
cufflinks 4.699        
cufflinks 3.912        
cufflinks 4.1        
cufflinks 5.088        
cufflinks 3.577        
cufflinks 4.41        
cufflinks 5.596        
cufflinks 0.668       Low
cufflinks 23.203     High High

0 Strain