Gene : Sobic.009G213950 S. bicolor v3.1.1
Defline:  (1 of 2) K04799 - flap endonuclease-1 (FEN1, RAD2) Genomic Order:  2212
Name:  ? Sobic.009G213950 Secondary Identifier:  ? PAC:37921895
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G213950 0.5kb upstream 0.5kb upstream 4660 true Chr09: 55924466-55929125 Sorghum bicolor
Sobic.009G213950 0.5kb upstream 0.5kb upstream 500 false Chr09: 55928626-55929125 Sorghum bicolor
Sobic.009G213950 0.5kb downstream 0.5kb downstream 4660 true Chr09: 55923966-55928625 Sorghum bicolor
Sobic.009G213950 0.5kb downstream 0.5kb downstream 500 false Chr09: 55923966-55924465 Sorghum bicolor
Sobic.009G213950 1.0kb upstream 1.0kb upstream 5160 true Chr09: 55924466-55929625 Sorghum bicolor
Sobic.009G213950 1.0kb upstream 1.0kb upstream 1000 false Chr09: 55928626-55929625 Sorghum bicolor
Sobic.009G213950 1.0kb downstream 1.0kb downstream 5160 true Chr09: 55923466-55928625 Sorghum bicolor
Sobic.009G213950 1.0kb downstream 1.0kb downstream 1000 false Chr09: 55923466-55924465 Sorghum bicolor
Sobic.009G213950 2.0kb upstream 2.0kb upstream 6160 true Chr09: 55924466-55930625 Sorghum bicolor
Sobic.009G213950 2.0kb upstream 2.0kb upstream 2000 false Chr09: 55928626-55930625 Sorghum bicolor
Sobic.009G213950 2.0kb downstream 2.0kb downstream 6160 true Chr09: 55922466-55928625 Sorghum bicolor
Sobic.009G213950 2.0kb downstream 2.0kb downstream 2000 false Chr09: 55922466-55924465 Sorghum bicolor
Sobic.009G213950 5.0kb upstream 5.0kb upstream 9160 true Chr09: 55924466-55933625 Sorghum bicolor
Sobic.009G213950 5.0kb upstream 5.0kb upstream 5000 false Chr09: 55928626-55933625 Sorghum bicolor
Sobic.009G213950 5.0kb downstream 5.0kb downstream 9160 true Chr09: 55919466-55928625 Sorghum bicolor
Sobic.009G213950 5.0kb downstream 5.0kb downstream 5000 false Chr09: 55919466-55924465 Sorghum bicolor
Sobic.009G213950 10.0kb upstream 10.0kb upstream 14160 true Chr09: 55924466-55938625 Sorghum bicolor
Sobic.009G213950 10.0kb upstream 10.0kb upstream 10000 false Chr09: 55928626-55938625 Sorghum bicolor
Sobic.009G213950 10.0kb downstream 10.0kb downstream 14160 true Chr09: 55914466-55928625 Sorghum bicolor
Sobic.009G213950 10.0kb downstream 10.0kb downstream 10000 false Chr09: 55914466-55924465 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185387 5267 Panicoideae View MSA
124568841 5269 Grass View MSA
122045143 5273 Angiosperm View MSA
121348118 5274 Embryophyte View MSA
123424263 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.35       High
cufflinks 0.321       Low
cufflinks 1.088        
cufflinks 1.807        
cufflinks 6.288        
cufflinks 1.983        
cufflinks 3.337        
cufflinks 0.33       Low
cufflinks 3.396        
cufflinks 4.374        
cufflinks 4.791        
cufflinks 3.308        
cufflinks 3.365        
cufflinks 3.757        
cufflinks 3.282        
cufflinks 0.742       Low
cufflinks 3.524        
cufflinks 4.213        
cufflinks 0.582       Low
cufflinks 3.008        
cufflinks 14.192     High High
cufflinks 5.75        
cufflinks 4.495        
cufflinks 4.574        
cufflinks 0.429       Low
cufflinks 0.236       Low
cufflinks 3.371        
cufflinks 3.086        
cufflinks 0.878       Low
cufflinks 5.171        

0 Strain