Gene : Sobic.009G228900 S. bicolor v3.1.1
Defline:  (1 of 2) K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) Genomic Order:  2363
Name:  ? Sobic.009G228900 Secondary Identifier:  ? PAC:37921560
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G228900 0.5kb upstream 0.5kb upstream 4458 true Chr09: 56958265-56962722 Sorghum bicolor
Sobic.009G228900 0.5kb upstream 0.5kb upstream 500 false Chr09: 56962223-56962722 Sorghum bicolor
Sobic.009G228900 0.5kb downstream 0.5kb downstream 4458 true Chr09: 56957765-56962222 Sorghum bicolor
Sobic.009G228900 0.5kb downstream 0.5kb downstream 500 false Chr09: 56957765-56958264 Sorghum bicolor
Sobic.009G228900 1.0kb upstream 1.0kb upstream 4958 true Chr09: 56958265-56963222 Sorghum bicolor
Sobic.009G228900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 56962223-56963222 Sorghum bicolor
Sobic.009G228900 1.0kb downstream 1.0kb downstream 4958 true Chr09: 56957265-56962222 Sorghum bicolor
Sobic.009G228900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 56957265-56958264 Sorghum bicolor
Sobic.009G228900 2.0kb upstream 2.0kb upstream 5958 true Chr09: 56958265-56964222 Sorghum bicolor
Sobic.009G228900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 56962223-56964222 Sorghum bicolor
Sobic.009G228900 2.0kb downstream 2.0kb downstream 5958 true Chr09: 56956265-56962222 Sorghum bicolor
Sobic.009G228900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 56956265-56958264 Sorghum bicolor
Sobic.009G228900 5.0kb upstream 5.0kb upstream 8958 true Chr09: 56958265-56967222 Sorghum bicolor
Sobic.009G228900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 56962223-56967222 Sorghum bicolor
Sobic.009G228900 5.0kb downstream 5.0kb downstream 8958 true Chr09: 56953265-56962222 Sorghum bicolor
Sobic.009G228900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 56953265-56958264 Sorghum bicolor
Sobic.009G228900 10.0kb upstream 10.0kb upstream 13958 true Chr09: 56958265-56972222 Sorghum bicolor
Sobic.009G228900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 56962223-56972222 Sorghum bicolor
Sobic.009G228900 10.0kb downstream 10.0kb downstream 13958 true Chr09: 56948265-56962222 Sorghum bicolor
Sobic.009G228900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 56948265-56958264 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186094 5267 Panicoideae View MSA
124580360 5269 Grass View MSA
122045515 5273 Angiosperm View MSA
121344104 5274 Embryophyte View MSA
123423845 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.029       High
cufflinks 0.071       Low
cufflinks 0.345        
cufflinks 1.014        
cufflinks 2.044        
cufflinks 2.221        
cufflinks 0.889        
cufflinks 0.089       Low
cufflinks 2.782        
cufflinks 2.774        
cufflinks 1.397        
cufflinks 1.5        
cufflinks 1.696        
cufflinks 1.231        
cufflinks 1.347        
cufflinks 0.218       Low
cufflinks 1.001        
cufflinks 1.222        
cufflinks 0.177       Low
cufflinks 0.929        
cufflinks 4.063       High
cufflinks 2.046        
cufflinks 1.582        
cufflinks 1.505        
cufflinks 0.129       Low
cufflinks 0.052       Low
cufflinks 1.359        
cufflinks 2.61        
cufflinks 0.464        
cufflinks 2.126        

0 Strain