Gene : Sobic.004G269800 S. bicolor v3.1.1
Defline:  (1 of 3) K05928 - tocopherol O-methyltransferase (E2.1.1.95) Genomic Order:  2822
Name:  ? Sobic.004G269800 Secondary Identifier:  ? PAC:37930671
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-1422 Sorghum bicolor pathologic  
Sbicolor PWY-7436 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G269800 0.5kb upstream 0.5kb upstream 4293 true Chr04: 61388484-61392776 Sorghum bicolor
Sobic.004G269800 0.5kb upstream 0.5kb upstream 500 false Chr04: 61392277-61392776 Sorghum bicolor
Sobic.004G269800 0.5kb downstream 0.5kb downstream 4293 true Chr04: 61387984-61392276 Sorghum bicolor
Sobic.004G269800 0.5kb downstream 0.5kb downstream 500 false Chr04: 61387984-61388483 Sorghum bicolor
Sobic.004G269800 1.0kb upstream 1.0kb upstream 4793 true Chr04: 61388484-61393276 Sorghum bicolor
Sobic.004G269800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 61392277-61393276 Sorghum bicolor
Sobic.004G269800 1.0kb downstream 1.0kb downstream 4793 true Chr04: 61387484-61392276 Sorghum bicolor
Sobic.004G269800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 61387484-61388483 Sorghum bicolor
Sobic.004G269800 2.0kb upstream 2.0kb upstream 5793 true Chr04: 61388484-61394276 Sorghum bicolor
Sobic.004G269800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 61392277-61394276 Sorghum bicolor
Sobic.004G269800 2.0kb downstream 2.0kb downstream 5793 true Chr04: 61386484-61392276 Sorghum bicolor
Sobic.004G269800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 61386484-61388483 Sorghum bicolor
Sobic.004G269800 5.0kb upstream 5.0kb upstream 8793 true Chr04: 61388484-61397276 Sorghum bicolor
Sobic.004G269800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 61392277-61397276 Sorghum bicolor
Sobic.004G269800 5.0kb downstream 5.0kb downstream 8793 true Chr04: 61383484-61392276 Sorghum bicolor
Sobic.004G269800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 61383484-61388483 Sorghum bicolor
Sobic.004G269800 10.0kb upstream 10.0kb upstream 13793 true Chr04: 61388484-61402276 Sorghum bicolor
Sobic.004G269800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 61392277-61402276 Sorghum bicolor
Sobic.004G269800 10.0kb downstream 10.0kb downstream 13793 true Chr04: 61378484-61392276 Sorghum bicolor
Sobic.004G269800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 61378484-61388483 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182929 5267 Panicoideae View MSA
124569440 5269 Grass View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.86     High High
cufflinks 34.403     High High
cufflinks 21.732     High  
cufflinks 12.086        
cufflinks 5.693       Low
cufflinks 64.542     High High
cufflinks 15.0     High  
cufflinks 13.464     High  
cufflinks 15.803     High  
cufflinks 15.765     High  
cufflinks 6.79        
cufflinks 5.84       Low
cufflinks 15.69     High  
cufflinks 6.205       Low
cufflinks 11.17        
cufflinks 27.384     High High
cufflinks 15.017     High  
cufflinks 13.556     High  
cufflinks 18.248     High  
cufflinks 20.33     High  
cufflinks 9.673        
cufflinks 7.664        
cufflinks 6.901        
cufflinks 6.694       Low
cufflinks 30.247     High High
cufflinks 27.254     High High
cufflinks 7.3        
cufflinks 11.835     High  
cufflinks 6.728       Low
cufflinks 10.425        

0 Strain