Gene : Sobic.009G231800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31384//PTHR31384:SF5 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 3 Genomic Order:  2392
Name:  ? Sobic.009G231800 Secondary Identifier:  ? PAC:37922556
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G231800 0.5kb upstream 0.5kb upstream 6211 true Chr09: 57188179-57194389 Sorghum bicolor
Sobic.009G231800 0.5kb upstream 0.5kb upstream 500 false Chr09: 57188179-57188678 Sorghum bicolor
Sobic.009G231800 0.5kb downstream 0.5kb downstream 6211 true Chr09: 57188679-57194889 Sorghum bicolor
Sobic.009G231800 0.5kb downstream 0.5kb downstream 500 false Chr09: 57194390-57194889 Sorghum bicolor
Sobic.009G231800 1.0kb upstream 1.0kb upstream 6711 true Chr09: 57187679-57194389 Sorghum bicolor
Sobic.009G231800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 57187679-57188678 Sorghum bicolor
Sobic.009G231800 1.0kb downstream 1.0kb downstream 6711 true Chr09: 57188679-57195389 Sorghum bicolor
Sobic.009G231800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 57194390-57195389 Sorghum bicolor
Sobic.009G231800 2.0kb upstream 2.0kb upstream 7711 true Chr09: 57186679-57194389 Sorghum bicolor
Sobic.009G231800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 57186679-57188678 Sorghum bicolor
Sobic.009G231800 2.0kb downstream 2.0kb downstream 7711 true Chr09: 57188679-57196389 Sorghum bicolor
Sobic.009G231800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 57194390-57196389 Sorghum bicolor
Sobic.009G231800 5.0kb upstream 5.0kb upstream 10711 true Chr09: 57183679-57194389 Sorghum bicolor
Sobic.009G231800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 57183679-57188678 Sorghum bicolor
Sobic.009G231800 5.0kb downstream 5.0kb downstream 10711 true Chr09: 57188679-57199389 Sorghum bicolor
Sobic.009G231800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 57194390-57199389 Sorghum bicolor
Sobic.009G231800 10.0kb upstream 10.0kb upstream 15711 true Chr09: 57178679-57194389 Sorghum bicolor
Sobic.009G231800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 57178679-57188678 Sorghum bicolor
Sobic.009G231800 10.0kb downstream 10.0kb downstream 15711 true Chr09: 57188679-57204389 Sorghum bicolor
Sobic.009G231800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 57194390-57204389 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185758 5267 Panicoideae View MSA
124579390 5269 Grass View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.513        
cufflinks 7.691     High  
cufflinks 7.552        
cufflinks 5.004        
cufflinks 9.786       High
cufflinks 5.645        
cufflinks 8.946        
cufflinks 8.951     High  
cufflinks 5.051        
cufflinks 4.982        
cufflinks 2.986       Low
cufflinks 5.27        
cufflinks 10.351       High
cufflinks 5.041        
cufflinks 4.928        
cufflinks 5.12        
cufflinks 8.59        
cufflinks 9.204        
cufflinks 3.848       Low
cufflinks 8.457        
cufflinks 21.65     High High
cufflinks 3.442       Low
cufflinks 5.455        
cufflinks 4.888        
cufflinks 6.978        
cufflinks 7.029     High  
cufflinks 4.308        
cufflinks 4.361        
cufflinks 8.811        
cufflinks 4.302        

0 Strain