Gene : Sobic.009G162100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22883:SF92 - PROTEIN S-ACYLTRANSFERASE 16-RELATED Genomic Order:  1667
Name:  ? Sobic.009G162100 Secondary Identifier:  ? PAC:37919403
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G162100 0.5kb upstream 0.5kb upstream 3984 true Chr09: 51903505-51907488 Sorghum bicolor
Sobic.009G162100 0.5kb upstream 0.5kb upstream 500 false Chr09: 51903505-51904004 Sorghum bicolor
Sobic.009G162100 0.5kb downstream 0.5kb downstream 3984 true Chr09: 51904005-51907988 Sorghum bicolor
Sobic.009G162100 0.5kb downstream 0.5kb downstream 500 false Chr09: 51907489-51907988 Sorghum bicolor
Sobic.009G162100 1.0kb upstream 1.0kb upstream 4484 true Chr09: 51903005-51907488 Sorghum bicolor
Sobic.009G162100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 51903005-51904004 Sorghum bicolor
Sobic.009G162100 1.0kb downstream 1.0kb downstream 4484 true Chr09: 51904005-51908488 Sorghum bicolor
Sobic.009G162100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 51907489-51908488 Sorghum bicolor
Sobic.009G162100 2.0kb upstream 2.0kb upstream 5484 true Chr09: 51902005-51907488 Sorghum bicolor
Sobic.009G162100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 51902005-51904004 Sorghum bicolor
Sobic.009G162100 2.0kb downstream 2.0kb downstream 5484 true Chr09: 51904005-51909488 Sorghum bicolor
Sobic.009G162100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 51907489-51909488 Sorghum bicolor
Sobic.009G162100 5.0kb upstream 5.0kb upstream 8484 true Chr09: 51899005-51907488 Sorghum bicolor
Sobic.009G162100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 51899005-51904004 Sorghum bicolor
Sobic.009G162100 5.0kb downstream 5.0kb downstream 8484 true Chr09: 51904005-51912488 Sorghum bicolor
Sobic.009G162100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 51907489-51912488 Sorghum bicolor
Sobic.009G162100 10.0kb upstream 10.0kb upstream 13484 true Chr09: 51894005-51907488 Sorghum bicolor
Sobic.009G162100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 51894005-51904004 Sorghum bicolor
Sobic.009G162100 10.0kb downstream 10.0kb downstream 13484 true Chr09: 51904005-51917488 Sorghum bicolor
Sobic.009G162100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 51907489-51917488 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184938 5267 Panicoideae View MSA
124583112 5269 Grass View MSA
122049119 5273 Angiosperm View MSA
121349855 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.667        
cufflinks 2.889       Low
cufflinks 5.175        
cufflinks 6.629       High
cufflinks 4.015        
cufflinks 7.458       High
cufflinks 4.065        
cufflinks 3.097       Low
cufflinks 4.507        
cufflinks 4.821        
cufflinks 4.346        
cufflinks 4.776        
cufflinks 6.591       High
cufflinks 4.547        
cufflinks 7.344       High
cufflinks 4.62        
cufflinks 4.56        
cufflinks 4.671        
cufflinks 3.523        
cufflinks 5.539        
cufflinks 3.885        
cufflinks 4.585        
cufflinks 4.813        
cufflinks 4.463        
cufflinks 3.452       Low
cufflinks 2.454       Low
cufflinks 5.307        
cufflinks 2.191       Low
cufflinks 4.207        
cufflinks 4.831        

0 Strain