Gene : Sobic.009G163600 S. bicolor v3.1.1
Defline:  (1 of 2) K11600 - exosome complex component RRP41 (RRP41, EXOSC4, SKI6) Genomic Order:  1681
Name:  ? Sobic.009G163600 Secondary Identifier:  ? PAC:37919637
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G163600 0.5kb upstream 0.5kb upstream 5239 true Chr09: 52010422-52015660 Sorghum bicolor
Sobic.009G163600 0.5kb upstream 0.5kb upstream 500 false Chr09: 52010422-52010921 Sorghum bicolor
Sobic.009G163600 0.5kb downstream 0.5kb downstream 5239 true Chr09: 52010922-52016160 Sorghum bicolor
Sobic.009G163600 0.5kb downstream 0.5kb downstream 500 false Chr09: 52015661-52016160 Sorghum bicolor
Sobic.009G163600 1.0kb upstream 1.0kb upstream 5739 true Chr09: 52009922-52015660 Sorghum bicolor
Sobic.009G163600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 52009922-52010921 Sorghum bicolor
Sobic.009G163600 1.0kb downstream 1.0kb downstream 5739 true Chr09: 52010922-52016660 Sorghum bicolor
Sobic.009G163600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 52015661-52016660 Sorghum bicolor
Sobic.009G163600 2.0kb upstream 2.0kb upstream 6739 true Chr09: 52008922-52015660 Sorghum bicolor
Sobic.009G163600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 52008922-52010921 Sorghum bicolor
Sobic.009G163600 2.0kb downstream 2.0kb downstream 6739 true Chr09: 52010922-52017660 Sorghum bicolor
Sobic.009G163600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 52015661-52017660 Sorghum bicolor
Sobic.009G163600 5.0kb upstream 5.0kb upstream 9739 true Chr09: 52005922-52015660 Sorghum bicolor
Sobic.009G163600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 52005922-52010921 Sorghum bicolor
Sobic.009G163600 5.0kb downstream 5.0kb downstream 9739 true Chr09: 52010922-52020660 Sorghum bicolor
Sobic.009G163600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 52015661-52020660 Sorghum bicolor
Sobic.009G163600 10.0kb upstream 10.0kb upstream 14739 true Chr09: 52000922-52015660 Sorghum bicolor
Sobic.009G163600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 52000922-52010921 Sorghum bicolor
Sobic.009G163600 10.0kb downstream 10.0kb downstream 14739 true Chr09: 52010922-52025660 Sorghum bicolor
Sobic.009G163600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 52015661-52025660 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186094 5267 Panicoideae View MSA
124580360 5269 Grass View MSA
122045515 5273 Angiosperm View MSA
121344104 5274 Embryophyte View MSA
123423845 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.166       High
cufflinks 0.305       Low
cufflinks 0.874        
cufflinks 1.536        
cufflinks 2.131        
cufflinks 1.492        
cufflinks 0.742        
cufflinks 0.207       Low
cufflinks 2.703       High
cufflinks 2.599       High
cufflinks 0.794        
cufflinks 0.757        
cufflinks 1.437        
cufflinks 0.752        
cufflinks 2.214        
cufflinks 0.448       Low
cufflinks 0.708        
cufflinks 0.841        
cufflinks 0.405       Low
cufflinks 0.575        
cufflinks 3.49       High
cufflinks 1.215        
cufflinks 0.698        
cufflinks 0.877        
cufflinks 0.294       Low
cufflinks 0.198       Low
cufflinks 1.388        
cufflinks 14.137     High High
cufflinks 0.611        
cufflinks 3.209       High

0 Strain