Gene : Sobic.004G321700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13068//PTHR13068:SF8 - CGI-12 PROTEIN-RELATED // EXPRESSED PROTEIN Genomic Order:  3374
Name:  ? Sobic.004G321700 Secondary Identifier:  ? PAC:37930444
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G321700 0.5kb upstream 0.5kb upstream 3277 true Chr04: 65675085-65678361 Sorghum bicolor
Sobic.004G321700 0.5kb upstream 0.5kb upstream 500 false Chr04: 65677862-65678361 Sorghum bicolor
Sobic.004G321700 0.5kb downstream 0.5kb downstream 3277 true Chr04: 65674585-65677861 Sorghum bicolor
Sobic.004G321700 0.5kb downstream 0.5kb downstream 500 false Chr04: 65674585-65675084 Sorghum bicolor
Sobic.004G321700 1.0kb upstream 1.0kb upstream 3777 true Chr04: 65675085-65678861 Sorghum bicolor
Sobic.004G321700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 65677862-65678861 Sorghum bicolor
Sobic.004G321700 1.0kb downstream 1.0kb downstream 3777 true Chr04: 65674085-65677861 Sorghum bicolor
Sobic.004G321700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 65674085-65675084 Sorghum bicolor
Sobic.004G321700 2.0kb upstream 2.0kb upstream 4777 true Chr04: 65675085-65679861 Sorghum bicolor
Sobic.004G321700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 65677862-65679861 Sorghum bicolor
Sobic.004G321700 2.0kb downstream 2.0kb downstream 4777 true Chr04: 65673085-65677861 Sorghum bicolor
Sobic.004G321700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 65673085-65675084 Sorghum bicolor
Sobic.004G321700 5.0kb upstream 5.0kb upstream 7777 true Chr04: 65675085-65682861 Sorghum bicolor
Sobic.004G321700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 65677862-65682861 Sorghum bicolor
Sobic.004G321700 5.0kb downstream 5.0kb downstream 7777 true Chr04: 65670085-65677861 Sorghum bicolor
Sobic.004G321700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 65670085-65675084 Sorghum bicolor
Sobic.004G321700 10.0kb upstream 10.0kb upstream 12777 true Chr04: 65675085-65687861 Sorghum bicolor
Sobic.004G321700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 65677862-65687861 Sorghum bicolor
Sobic.004G321700 10.0kb downstream 10.0kb downstream 12777 true Chr04: 65665085-65677861 Sorghum bicolor
Sobic.004G321700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 65665085-65675084 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183142 5267 Panicoideae View MSA
124570776 5269 Grass View MSA
122041576 5273 Angiosperm View MSA
121347791 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.621       High
cufflinks 0.613       Low
cufflinks 1.158       Low
cufflinks 2.341        
cufflinks 4.303        
cufflinks 5.094       High
cufflinks 2.142        
cufflinks 0.88       Low
cufflinks 4.181        
cufflinks 4.05        
cufflinks 2.965        
cufflinks 3.958        
cufflinks 2.584        
cufflinks 3.664        
cufflinks 3.136        
cufflinks 1.808        
cufflinks 2.277        
cufflinks 2.319        
cufflinks 2.24        
cufflinks 3.185        
cufflinks 6.09       High
cufflinks 3.134        
cufflinks 3.55        
cufflinks 3.274        
cufflinks 1.266       Low
cufflinks 0.654       Low
cufflinks 2.722        
cufflinks 8.024       High
cufflinks 1.536       Low
cufflinks 4.438        

0 Strain