Gene : Sobic.004G319400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13710//PTHR13710:SF81 - DNA HELICASE RECQ FAMILY MEMBER // ATP-DEPENDENT DNA HELICASE Q-LIKE 3 Genomic Order:  3351
Name:  ? Sobic.004G319400 Secondary Identifier:  ? PAC:37929037
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G319400 0.5kb upstream 0.5kb upstream 5756 true Chr04: 65450646-65456401 Sorghum bicolor
Sobic.004G319400 0.5kb upstream 0.5kb upstream 500 false Chr04: 65455902-65456401 Sorghum bicolor
Sobic.004G319400 0.5kb downstream 0.5kb downstream 5756 true Chr04: 65450146-65455901 Sorghum bicolor
Sobic.004G319400 0.5kb downstream 0.5kb downstream 500 false Chr04: 65450146-65450645 Sorghum bicolor
Sobic.004G319400 1.0kb upstream 1.0kb upstream 6256 true Chr04: 65450646-65456901 Sorghum bicolor
Sobic.004G319400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 65455902-65456901 Sorghum bicolor
Sobic.004G319400 1.0kb downstream 1.0kb downstream 6256 true Chr04: 65449646-65455901 Sorghum bicolor
Sobic.004G319400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 65449646-65450645 Sorghum bicolor
Sobic.004G319400 2.0kb upstream 2.0kb upstream 7256 true Chr04: 65450646-65457901 Sorghum bicolor
Sobic.004G319400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 65455902-65457901 Sorghum bicolor
Sobic.004G319400 2.0kb downstream 2.0kb downstream 7256 true Chr04: 65448646-65455901 Sorghum bicolor
Sobic.004G319400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 65448646-65450645 Sorghum bicolor
Sobic.004G319400 5.0kb upstream 5.0kb upstream 10256 true Chr04: 65450646-65460901 Sorghum bicolor
Sobic.004G319400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 65455902-65460901 Sorghum bicolor
Sobic.004G319400 5.0kb downstream 5.0kb downstream 10256 true Chr04: 65445646-65455901 Sorghum bicolor
Sobic.004G319400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 65445646-65450645 Sorghum bicolor
Sobic.004G319400 10.0kb upstream 10.0kb upstream 15256 true Chr04: 65450646-65465901 Sorghum bicolor
Sobic.004G319400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 65455902-65465901 Sorghum bicolor
Sobic.004G319400 10.0kb downstream 10.0kb downstream 15256 true Chr04: 65440646-65455901 Sorghum bicolor
Sobic.004G319400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 65440646-65450645 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026250 5273 Angiosperm View MSA
122182523 5267 Panicoideae View MSA
124580881 5269 Grass View MSA
121296244 5274 Embryophyte View MSA
123427743 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.149       Low
cufflinks 0.22       Low
cufflinks 0.834       High
cufflinks 0.693       High
cufflinks 0.366        
cufflinks 1.355       High
cufflinks 0.516        
cufflinks 0.34        
cufflinks 0.655        
cufflinks 0.622        
cufflinks 0.2       Low
cufflinks 0.498        
cufflinks 0.593        
cufflinks 0.298        
cufflinks 0.521        
cufflinks 0.438        
cufflinks 0.499        
cufflinks 0.556        
cufflinks 0.481        
cufflinks 0.589        
cufflinks 0.832       High
cufflinks 0.222       Low
cufflinks 0.323        
cufflinks 0.311        
cufflinks 0.392        
cufflinks 0.236        
cufflinks 0.397        
cufflinks 0.133       Low
cufflinks 0.48        
cufflinks 0.539        

0 Strain