Gene : Sobic.004G319800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10772//PTHR10772:SF0 - 10 KDA HEAT SHOCK PROTEIN // 20 KDA CHAPERONIN, CHLOROPLASTIC Genomic Order:  3355
Name:  ? Sobic.004G319800 Secondary Identifier:  ? PAC:37933283
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G319800 0.5kb upstream 0.5kb upstream 3858 true Chr04: 65478703-65482560 Sorghum bicolor
Sobic.004G319800 0.5kb upstream 0.5kb upstream 500 false Chr04: 65482061-65482560 Sorghum bicolor
Sobic.004G319800 0.5kb downstream 0.5kb downstream 3858 true Chr04: 65478203-65482060 Sorghum bicolor
Sobic.004G319800 0.5kb downstream 0.5kb downstream 500 false Chr04: 65478203-65478702 Sorghum bicolor
Sobic.004G319800 1.0kb upstream 1.0kb upstream 4358 true Chr04: 65478703-65483060 Sorghum bicolor
Sobic.004G319800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 65482061-65483060 Sorghum bicolor
Sobic.004G319800 1.0kb downstream 1.0kb downstream 4358 true Chr04: 65477703-65482060 Sorghum bicolor
Sobic.004G319800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 65477703-65478702 Sorghum bicolor
Sobic.004G319800 2.0kb upstream 2.0kb upstream 5358 true Chr04: 65478703-65484060 Sorghum bicolor
Sobic.004G319800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 65482061-65484060 Sorghum bicolor
Sobic.004G319800 2.0kb downstream 2.0kb downstream 5358 true Chr04: 65476703-65482060 Sorghum bicolor
Sobic.004G319800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 65476703-65478702 Sorghum bicolor
Sobic.004G319800 5.0kb upstream 5.0kb upstream 8358 true Chr04: 65478703-65487060 Sorghum bicolor
Sobic.004G319800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 65482061-65487060 Sorghum bicolor
Sobic.004G319800 5.0kb downstream 5.0kb downstream 8358 true Chr04: 65473703-65482060 Sorghum bicolor
Sobic.004G319800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 65473703-65478702 Sorghum bicolor
Sobic.004G319800 10.0kb upstream 10.0kb upstream 13358 true Chr04: 65478703-65492060 Sorghum bicolor
Sobic.004G319800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 65482061-65492060 Sorghum bicolor
Sobic.004G319800 10.0kb downstream 10.0kb downstream 13358 true Chr04: 65468703-65482060 Sorghum bicolor
Sobic.004G319800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 65468703-65478702 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179962 5267 Panicoideae View MSA
124568437 5269 Grass View MSA
122045141 5273 Angiosperm View MSA
121344791 5274 Embryophyte View MSA
123424643 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.063     High  
cufflinks 1.18        
cufflinks 0.595       Low
cufflinks 0.132       Low
cufflinks 13.024     High  
cufflinks 1.019       Low
cufflinks 30.194     High High
cufflinks 26.434     High High
cufflinks 1.226        
cufflinks 2.154        
cufflinks 8.702        
cufflinks 5.233        
cufflinks 1.611        
cufflinks 6.474        
cufflinks 5.356        
cufflinks 1.072       Low
cufflinks 33.496     High High
cufflinks 39.666     High High
cufflinks 1.287        
cufflinks 9.173        
cufflinks 29.128     High High
cufflinks 12.265     High  
cufflinks 9.19        
cufflinks 10.03        
cufflinks 0.157       Low
cufflinks 0.567       Low
cufflinks 2.442        
cufflinks 9.326        
cufflinks 99.705     High High
cufflinks 12.512     High  

0 Strain