Gene : Sobic.004G316700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21717:SF25 - MYB FAMILY TRANSCRIPTION FACTOR TRFL6-RELATED Genomic Order:  3324
Name:  ? Sobic.004G316700 Secondary Identifier:  ? PAC:37930347
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G316700 0.5kb upstream 0.5kb upstream 5919 true Chr04: 65249117-65255035 Sorghum bicolor
Sobic.004G316700 0.5kb upstream 0.5kb upstream 500 false Chr04: 65249117-65249616 Sorghum bicolor
Sobic.004G316700 0.5kb downstream 0.5kb downstream 5919 true Chr04: 65249617-65255535 Sorghum bicolor
Sobic.004G316700 0.5kb downstream 0.5kb downstream 500 false Chr04: 65255036-65255535 Sorghum bicolor
Sobic.004G316700 1.0kb upstream 1.0kb upstream 6419 true Chr04: 65248617-65255035 Sorghum bicolor
Sobic.004G316700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 65248617-65249616 Sorghum bicolor
Sobic.004G316700 1.0kb downstream 1.0kb downstream 6419 true Chr04: 65249617-65256035 Sorghum bicolor
Sobic.004G316700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 65255036-65256035 Sorghum bicolor
Sobic.004G316700 2.0kb upstream 2.0kb upstream 7419 true Chr04: 65247617-65255035 Sorghum bicolor
Sobic.004G316700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 65247617-65249616 Sorghum bicolor
Sobic.004G316700 2.0kb downstream 2.0kb downstream 7419 true Chr04: 65249617-65257035 Sorghum bicolor
Sobic.004G316700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 65255036-65257035 Sorghum bicolor
Sobic.004G316700 5.0kb upstream 5.0kb upstream 10419 true Chr04: 65244617-65255035 Sorghum bicolor
Sobic.004G316700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 65244617-65249616 Sorghum bicolor
Sobic.004G316700 5.0kb downstream 5.0kb downstream 10419 true Chr04: 65249617-65260035 Sorghum bicolor
Sobic.004G316700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 65255036-65260035 Sorghum bicolor
Sobic.004G316700 10.0kb upstream 10.0kb upstream 15419 true Chr04: 65239617-65255035 Sorghum bicolor
Sobic.004G316700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 65239617-65249616 Sorghum bicolor
Sobic.004G316700 10.0kb downstream 10.0kb downstream 15419 true Chr04: 65249617-65265035 Sorghum bicolor
Sobic.004G316700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 65255036-65265035 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180914 5267 Panicoideae View MSA
124589901 5269 Grass View MSA
122046145 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348022 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.989       Low
cufflinks 3.633       Low
cufflinks 7.482       High
cufflinks 7.055        
cufflinks 4.467        
cufflinks 5.922        
cufflinks 5.174        
cufflinks 3.495       Low
cufflinks 9.2       High
cufflinks 9.214       High
cufflinks 4.877        
cufflinks 6.971        
cufflinks 9.162       High
cufflinks 6.443        
cufflinks 9.192       High
cufflinks 5.599        
cufflinks 5.701        
cufflinks 5.384        
cufflinks 6.804        
cufflinks 6.832        
cufflinks 4.132        
cufflinks 4.66        
cufflinks 5.716        
cufflinks 5.033        
cufflinks 5.044        
cufflinks 3.323       Low
cufflinks 6.753        
cufflinks 4.548        
cufflinks 3.768       Low
cufflinks 7.264       High

0 Strain