Gene : Sobic.009G171000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12542//PTHR12542:SF30 - EXOCYST COMPLEX PROTEIN EXO70 // SUBFAMILY NOT NAMED Genomic Order:  1762
Name:  ? Sobic.009G171000 Secondary Identifier:  ? PAC:37920033
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G171000 0.5kb upstream 0.5kb upstream 5863 true Chr09: 52653703-52659565 Sorghum bicolor
Sobic.009G171000 0.5kb upstream 0.5kb upstream 500 false Chr09: 52659066-52659565 Sorghum bicolor
Sobic.009G171000 0.5kb downstream 0.5kb downstream 5863 true Chr09: 52653203-52659065 Sorghum bicolor
Sobic.009G171000 0.5kb downstream 0.5kb downstream 500 false Chr09: 52653203-52653702 Sorghum bicolor
Sobic.009G171000 1.0kb upstream 1.0kb upstream 6363 true Chr09: 52653703-52660065 Sorghum bicolor
Sobic.009G171000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 52659066-52660065 Sorghum bicolor
Sobic.009G171000 1.0kb downstream 1.0kb downstream 6363 true Chr09: 52652703-52659065 Sorghum bicolor
Sobic.009G171000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 52652703-52653702 Sorghum bicolor
Sobic.009G171000 2.0kb upstream 2.0kb upstream 7363 true Chr09: 52653703-52661065 Sorghum bicolor
Sobic.009G171000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 52659066-52661065 Sorghum bicolor
Sobic.009G171000 2.0kb downstream 2.0kb downstream 7363 true Chr09: 52651703-52659065 Sorghum bicolor
Sobic.009G171000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 52651703-52653702 Sorghum bicolor
Sobic.009G171000 5.0kb upstream 5.0kb upstream 10363 true Chr09: 52653703-52664065 Sorghum bicolor
Sobic.009G171000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 52659066-52664065 Sorghum bicolor
Sobic.009G171000 5.0kb downstream 5.0kb downstream 10363 true Chr09: 52648703-52659065 Sorghum bicolor
Sobic.009G171000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 52648703-52653702 Sorghum bicolor
Sobic.009G171000 10.0kb upstream 10.0kb upstream 15363 true Chr09: 52653703-52669065 Sorghum bicolor
Sobic.009G171000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 52659066-52669065 Sorghum bicolor
Sobic.009G171000 10.0kb downstream 10.0kb downstream 15363 true Chr09: 52643703-52659065 Sorghum bicolor
Sobic.009G171000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 52643703-52653702 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182544 5267 Panicoideae View MSA
124580817 5269 Grass View MSA
122047493 5273 Angiosperm View MSA
123429009 5275 Viridiplantae View MSA
121351326 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.779     High  
cufflinks 9.22     High Low
cufflinks 38.186     High High
cufflinks 49.88     High High
cufflinks 30.183     High High
cufflinks 34.116     High High
cufflinks 10.751       Low
cufflinks 8.738     High Low
cufflinks 22.038     High  
cufflinks 17.116     High  
cufflinks 17.793     High  
cufflinks 16.254     High  
cufflinks 27.787     High  
cufflinks 15.171     High  
cufflinks 31.258     High High
cufflinks 21.496     High  
cufflinks 10.987       Low
cufflinks 11.304        
cufflinks 35.125     High High
cufflinks 14.472     High  
cufflinks 20.145     High  
cufflinks 11.221        
cufflinks 13.088     High  
cufflinks 12.62     High  
cufflinks 20.38     High  
cufflinks 7.165     High Low
cufflinks 23.579     High  
cufflinks 6.955       Low
cufflinks 10.015       Low
cufflinks 29.49     High  

0 Strain