Gene : Sobic.009G171700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Genomic Order:  1769
Name:  ? Sobic.009G171700 Secondary Identifier:  ? PAC:37920754
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G171700 0.5kb upstream 0.5kb upstream 3975 true Chr09: 52702521-52706495 Sorghum bicolor
Sobic.009G171700 0.5kb upstream 0.5kb upstream 500 false Chr09: 52705996-52706495 Sorghum bicolor
Sobic.009G171700 0.5kb downstream 0.5kb downstream 3975 true Chr09: 52702021-52705995 Sorghum bicolor
Sobic.009G171700 0.5kb downstream 0.5kb downstream 500 false Chr09: 52702021-52702520 Sorghum bicolor
Sobic.009G171700 1.0kb upstream 1.0kb upstream 4475 true Chr09: 52702521-52706995 Sorghum bicolor
Sobic.009G171700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 52705996-52706995 Sorghum bicolor
Sobic.009G171700 1.0kb downstream 1.0kb downstream 4475 true Chr09: 52701521-52705995 Sorghum bicolor
Sobic.009G171700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 52701521-52702520 Sorghum bicolor
Sobic.009G171700 2.0kb upstream 2.0kb upstream 5475 true Chr09: 52702521-52707995 Sorghum bicolor
Sobic.009G171700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 52705996-52707995 Sorghum bicolor
Sobic.009G171700 2.0kb downstream 2.0kb downstream 5475 true Chr09: 52700521-52705995 Sorghum bicolor
Sobic.009G171700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 52700521-52702520 Sorghum bicolor
Sobic.009G171700 5.0kb upstream 5.0kb upstream 8475 true Chr09: 52702521-52710995 Sorghum bicolor
Sobic.009G171700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 52705996-52710995 Sorghum bicolor
Sobic.009G171700 5.0kb downstream 5.0kb downstream 8475 true Chr09: 52697521-52705995 Sorghum bicolor
Sobic.009G171700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 52697521-52702520 Sorghum bicolor
Sobic.009G171700 10.0kb upstream 10.0kb upstream 13475 true Chr09: 52702521-52715995 Sorghum bicolor
Sobic.009G171700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 52705996-52715995 Sorghum bicolor
Sobic.009G171700 10.0kb downstream 10.0kb downstream 13475 true Chr09: 52692521-52705995 Sorghum bicolor
Sobic.009G171700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 52692521-52702520 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180462 5267 Panicoideae View MSA
124582794 5269 Grass View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.362     High High
cufflinks 8.425     High Low
cufflinks 21.98     High High
cufflinks 21.675     High High
cufflinks 13.993     High  
cufflinks 17.514     High  
cufflinks 13.647     High  
cufflinks 8.222       Low
cufflinks 21.117     High High
cufflinks 17.523     High  
cufflinks 16.598     High  
cufflinks 18.662     High  
cufflinks 14.109     High  
cufflinks 21.301     High High
cufflinks 11.235        
cufflinks 13.593     High  
cufflinks 13.082     High  
cufflinks 13.498     High  
cufflinks 17.831     High  
cufflinks 16.154     High  
cufflinks 9.203       Low
cufflinks 14.075     High  
cufflinks 16.378     High  
cufflinks 17.482     High  
cufflinks 11.798     High  
cufflinks 7.401     High Low
cufflinks 17.725     High  
cufflinks 5.801       Low
cufflinks 9.752       Low
cufflinks 11.516        

0 Strain