Gene : Sobic.004G314000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13471 - TETRATRICOPEPTIDE-LIKE HELICAL Genomic Order:  3295
Name:  ? Sobic.004G314000 Secondary Identifier:  ? PAC:37929356
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G314000 0.5kb upstream 0.5kb upstream 9510 true Chr04: 65054824-65064333 Sorghum bicolor
Sobic.004G314000 0.5kb upstream 0.5kb upstream 500 false Chr04: 65054824-65055323 Sorghum bicolor
Sobic.004G314000 0.5kb downstream 0.5kb downstream 9510 true Chr04: 65055324-65064833 Sorghum bicolor
Sobic.004G314000 0.5kb downstream 0.5kb downstream 500 false Chr04: 65064334-65064833 Sorghum bicolor
Sobic.004G314000 1.0kb upstream 1.0kb upstream 10010 true Chr04: 65054324-65064333 Sorghum bicolor
Sobic.004G314000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 65054324-65055323 Sorghum bicolor
Sobic.004G314000 1.0kb downstream 1.0kb downstream 10010 true Chr04: 65055324-65065333 Sorghum bicolor
Sobic.004G314000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 65064334-65065333 Sorghum bicolor
Sobic.004G314000 2.0kb upstream 2.0kb upstream 11010 true Chr04: 65053324-65064333 Sorghum bicolor
Sobic.004G314000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 65053324-65055323 Sorghum bicolor
Sobic.004G314000 2.0kb downstream 2.0kb downstream 11010 true Chr04: 65055324-65066333 Sorghum bicolor
Sobic.004G314000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 65064334-65066333 Sorghum bicolor
Sobic.004G314000 5.0kb upstream 5.0kb upstream 14010 true Chr04: 65050324-65064333 Sorghum bicolor
Sobic.004G314000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 65050324-65055323 Sorghum bicolor
Sobic.004G314000 5.0kb downstream 5.0kb downstream 14010 true Chr04: 65055324-65069333 Sorghum bicolor
Sobic.004G314000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 65064334-65069333 Sorghum bicolor
Sobic.004G314000 10.0kb upstream 10.0kb upstream 19010 true Chr04: 65045324-65064333 Sorghum bicolor
Sobic.004G314000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 65045324-65055323 Sorghum bicolor
Sobic.004G314000 10.0kb downstream 10.0kb downstream 19010 true Chr04: 65055324-65074333 Sorghum bicolor
Sobic.004G314000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 65064334-65074333 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026294 5273 Angiosperm View MSA
122182077 5267 Panicoideae View MSA
124568438 5269 Grass View MSA
121345312 5274 Embryophyte View MSA
123423930 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.133       Low
cufflinks 0.697       Low
cufflinks 1.442        
cufflinks 1.506        
cufflinks 2.369        
cufflinks 2.772       High
cufflinks 1.455        
cufflinks 0.999       Low
cufflinks 3.687       High
cufflinks 3.277       High
cufflinks 1.774        
cufflinks 2.322        
cufflinks 2.906       High
cufflinks 1.625        
cufflinks 2.423        
cufflinks 1.176        
cufflinks 1.371        
cufflinks 1.483        
cufflinks 1.112       Low
cufflinks 1.856        
cufflinks 3.365       High
cufflinks 1.63        
cufflinks 1.862        
cufflinks 1.802        
cufflinks 1.384        
cufflinks 0.996       Low
cufflinks 1.724        
cufflinks 3.074       High
cufflinks 1.239        
cufflinks 2.735       High

0 Strain