Gene : Sobic.004G315300 S. bicolor v3.1.1
Defline:  (1 of 1) K03652 - DNA-3-methyladenine glycosylase (MPG) Genomic Order:  3308
Name:  ? Sobic.004G315300 Secondary Identifier:  ? PAC:37934050
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G315300 0.5kb upstream 0.5kb upstream 3078 true Chr04: 65161543-65164620 Sorghum bicolor
Sobic.004G315300 0.5kb upstream 0.5kb upstream 500 false Chr04: 65164121-65164620 Sorghum bicolor
Sobic.004G315300 0.5kb downstream 0.5kb downstream 3078 true Chr04: 65161043-65164120 Sorghum bicolor
Sobic.004G315300 0.5kb downstream 0.5kb downstream 500 false Chr04: 65161043-65161542 Sorghum bicolor
Sobic.004G315300 1.0kb upstream 1.0kb upstream 3578 true Chr04: 65161543-65165120 Sorghum bicolor
Sobic.004G315300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 65164121-65165120 Sorghum bicolor
Sobic.004G315300 1.0kb downstream 1.0kb downstream 3578 true Chr04: 65160543-65164120 Sorghum bicolor
Sobic.004G315300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 65160543-65161542 Sorghum bicolor
Sobic.004G315300 2.0kb upstream 2.0kb upstream 4578 true Chr04: 65161543-65166120 Sorghum bicolor
Sobic.004G315300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 65164121-65166120 Sorghum bicolor
Sobic.004G315300 2.0kb downstream 2.0kb downstream 4578 true Chr04: 65159543-65164120 Sorghum bicolor
Sobic.004G315300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 65159543-65161542 Sorghum bicolor
Sobic.004G315300 5.0kb upstream 5.0kb upstream 7578 true Chr04: 65161543-65169120 Sorghum bicolor
Sobic.004G315300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 65164121-65169120 Sorghum bicolor
Sobic.004G315300 5.0kb downstream 5.0kb downstream 7578 true Chr04: 65156543-65164120 Sorghum bicolor
Sobic.004G315300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 65156543-65161542 Sorghum bicolor
Sobic.004G315300 10.0kb upstream 10.0kb upstream 12578 true Chr04: 65161543-65174120 Sorghum bicolor
Sobic.004G315300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 65164121-65174120 Sorghum bicolor
Sobic.004G315300 10.0kb downstream 10.0kb downstream 12578 true Chr04: 65151543-65164120 Sorghum bicolor
Sobic.004G315300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 65151543-65161542 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186306 5267 Panicoideae View MSA
124571805 5269 Grass View MSA
122044995 5273 Angiosperm View MSA
121344812 5274 Embryophyte View MSA
123380104 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.114        
cufflinks 0.005     Low Low
cufflinks 0.012     Low Low
cufflinks 0.006     Low Low
cufflinks 0.887        
cufflinks 0.007     Low Low
cufflinks 0.403        
cufflinks 0.246        
cufflinks 0.047     Low  
cufflinks 0.108        
cufflinks 1.231       High
cufflinks 0.603        
cufflinks 0.133        
cufflinks 0.74        
cufflinks 0.663        
cufflinks 0.022     Low Low
cufflinks 0.227        
cufflinks 0.267        
cufflinks 0.009     Low Low
cufflinks 0.165        
cufflinks 2.029       High
cufflinks 0.664        
cufflinks 0.853        
cufflinks 0.881        
cufflinks 0.012     Low Low
cufflinks 0.021     Low Low
cufflinks 0.46        
cufflinks 0.204        
cufflinks 0.194        
cufflinks 1.147        

0 Strain