Gene : Sobic.004G312200 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR31429:SF1 - WRKY FAMILY TRANSCRIPTION FACTOR-RELATED Genomic Order:  3277
Name:  ? Sobic.004G312200 Secondary Identifier:  ? PAC:37933577
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G312200 0.5kb upstream 0.5kb upstream 3252 true Chr04: 64899647-64902898 Sorghum bicolor
Sobic.004G312200 0.5kb upstream 0.5kb upstream 500 false Chr04: 64899647-64900146 Sorghum bicolor
Sobic.004G312200 0.5kb downstream 0.5kb downstream 3252 true Chr04: 64900147-64903398 Sorghum bicolor
Sobic.004G312200 0.5kb downstream 0.5kb downstream 500 false Chr04: 64902899-64903398 Sorghum bicolor
Sobic.004G312200 1.0kb upstream 1.0kb upstream 3752 true Chr04: 64899147-64902898 Sorghum bicolor
Sobic.004G312200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 64899147-64900146 Sorghum bicolor
Sobic.004G312200 1.0kb downstream 1.0kb downstream 3752 true Chr04: 64900147-64903898 Sorghum bicolor
Sobic.004G312200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 64902899-64903898 Sorghum bicolor
Sobic.004G312200 2.0kb upstream 2.0kb upstream 4752 true Chr04: 64898147-64902898 Sorghum bicolor
Sobic.004G312200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 64898147-64900146 Sorghum bicolor
Sobic.004G312200 2.0kb downstream 2.0kb downstream 4752 true Chr04: 64900147-64904898 Sorghum bicolor
Sobic.004G312200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 64902899-64904898 Sorghum bicolor
Sobic.004G312200 5.0kb upstream 5.0kb upstream 7752 true Chr04: 64895147-64902898 Sorghum bicolor
Sobic.004G312200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 64895147-64900146 Sorghum bicolor
Sobic.004G312200 5.0kb downstream 5.0kb downstream 7752 true Chr04: 64900147-64907898 Sorghum bicolor
Sobic.004G312200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 64902899-64907898 Sorghum bicolor
Sobic.004G312200 10.0kb upstream 10.0kb upstream 12752 true Chr04: 64890147-64902898 Sorghum bicolor
Sobic.004G312200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 64890147-64900146 Sorghum bicolor
Sobic.004G312200 10.0kb downstream 10.0kb downstream 12752 true Chr04: 64900147-64912898 Sorghum bicolor
Sobic.004G312200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 64902899-64912898 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178636 5267 Panicoideae View MSA
124584175 5269 Grass View MSA
122044544 5273 Angiosperm View MSA
121310308 5274 Embryophyte View MSA
123347826 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.243        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.099        
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.039     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.182       High
cufflinks 9.657       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.966       High
cufflinks 0.007     Low Low
cufflinks 0.114        
cufflinks 0.055     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.436       High
cufflinks 5.262       High
cufflinks 5.453       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 2.697       High
cufflinks 0.016     Low  
cufflinks 0.018     Low  
cufflinks 0.024     Low  

0 Strain