Gene : Sobic.004G312800 S. bicolor v3.1.1
Defline:  (1 of 3) K18045 - tyrosine-protein phosphatase SIW14 [EC:3.1.3.48] (SIW14, OCA3) Genomic Order:  3283
Name:  ? Sobic.004G312800 Secondary Identifier:  ? PAC:37930996
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G312800 0.5kb upstream 0.5kb upstream 3428 true Chr04: 64961831-64965258 Sorghum bicolor
Sobic.004G312800 0.5kb upstream 0.5kb upstream 500 false Chr04: 64964759-64965258 Sorghum bicolor
Sobic.004G312800 0.5kb downstream 0.5kb downstream 3428 true Chr04: 64961331-64964758 Sorghum bicolor
Sobic.004G312800 0.5kb downstream 0.5kb downstream 500 false Chr04: 64961331-64961830 Sorghum bicolor
Sobic.004G312800 1.0kb upstream 1.0kb upstream 3928 true Chr04: 64961831-64965758 Sorghum bicolor
Sobic.004G312800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 64964759-64965758 Sorghum bicolor
Sobic.004G312800 1.0kb downstream 1.0kb downstream 3928 true Chr04: 64960831-64964758 Sorghum bicolor
Sobic.004G312800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 64960831-64961830 Sorghum bicolor
Sobic.004G312800 2.0kb upstream 2.0kb upstream 4928 true Chr04: 64961831-64966758 Sorghum bicolor
Sobic.004G312800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 64964759-64966758 Sorghum bicolor
Sobic.004G312800 2.0kb downstream 2.0kb downstream 4928 true Chr04: 64959831-64964758 Sorghum bicolor
Sobic.004G312800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 64959831-64961830 Sorghum bicolor
Sobic.004G312800 5.0kb upstream 5.0kb upstream 7928 true Chr04: 64961831-64969758 Sorghum bicolor
Sobic.004G312800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 64964759-64969758 Sorghum bicolor
Sobic.004G312800 5.0kb downstream 5.0kb downstream 7928 true Chr04: 64956831-64964758 Sorghum bicolor
Sobic.004G312800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 64956831-64961830 Sorghum bicolor
Sobic.004G312800 10.0kb upstream 10.0kb upstream 12928 true Chr04: 64961831-64974758 Sorghum bicolor
Sobic.004G312800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 64964759-64974758 Sorghum bicolor
Sobic.004G312800 10.0kb downstream 10.0kb downstream 12928 true Chr04: 64951831-64964758 Sorghum bicolor
Sobic.004G312800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 64951831-64961830 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188459 5267 Panicoideae View MSA
124573463 5269 Grass View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.658        
cufflinks 13.677     High High
cufflinks 5.596        
cufflinks 5.716        
cufflinks 5.388        
cufflinks 3.836        
cufflinks 3.261        
cufflinks 3.75        
cufflinks 1.803        
cufflinks 1.124        
cufflinks 2.02        
cufflinks 1.853        
cufflinks 5.084        
cufflinks 2.89        
cufflinks 1.27        
cufflinks 16.658     High High
cufflinks 2.331        
cufflinks 2.376        
cufflinks 2.292        
cufflinks 3.512        
cufflinks 5.486        
cufflinks 1.43        
cufflinks 1.168        
cufflinks 0.997       Low
cufflinks 6.509        
cufflinks 11.152     High High
cufflinks 2.672        
cufflinks 0.766       Low
cufflinks 0.316       Low
cufflinks 0.812       Low

0 Strain