Gene : Sobic.004G310200 S. bicolor v3.1.1
Defline:  (1 of 11) PF00069//PF01453 - Protein kinase domain (Pkinase) // D-mannose binding lectin (B_lectin) Genomic Order:  3256
Name:  ? Sobic.004G310200 Secondary Identifier:  ? PAC:37929523
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G310200 0.5kb upstream 0.5kb upstream 3722 true Chr04: 64703118-64706839 Sorghum bicolor
Sobic.004G310200 0.5kb upstream 0.5kb upstream 500 false Chr04: 64706340-64706839 Sorghum bicolor
Sobic.004G310200 0.5kb downstream 0.5kb downstream 3722 true Chr04: 64702618-64706339 Sorghum bicolor
Sobic.004G310200 0.5kb downstream 0.5kb downstream 500 false Chr04: 64702618-64703117 Sorghum bicolor
Sobic.004G310200 1.0kb upstream 1.0kb upstream 4222 true Chr04: 64703118-64707339 Sorghum bicolor
Sobic.004G310200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 64706340-64707339 Sorghum bicolor
Sobic.004G310200 1.0kb downstream 1.0kb downstream 4222 true Chr04: 64702118-64706339 Sorghum bicolor
Sobic.004G310200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 64702118-64703117 Sorghum bicolor
Sobic.004G310200 2.0kb upstream 2.0kb upstream 5222 true Chr04: 64703118-64708339 Sorghum bicolor
Sobic.004G310200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 64706340-64708339 Sorghum bicolor
Sobic.004G310200 2.0kb downstream 2.0kb downstream 5222 true Chr04: 64701118-64706339 Sorghum bicolor
Sobic.004G310200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 64701118-64703117 Sorghum bicolor
Sobic.004G310200 5.0kb upstream 5.0kb upstream 8222 true Chr04: 64703118-64711339 Sorghum bicolor
Sobic.004G310200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 64706340-64711339 Sorghum bicolor
Sobic.004G310200 5.0kb downstream 5.0kb downstream 8222 true Chr04: 64698118-64706339 Sorghum bicolor
Sobic.004G310200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 64698118-64703117 Sorghum bicolor
Sobic.004G310200 10.0kb upstream 10.0kb upstream 13222 true Chr04: 64703118-64716339 Sorghum bicolor
Sobic.004G310200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 64706340-64716339 Sorghum bicolor
Sobic.004G310200 10.0kb downstream 10.0kb downstream 13222 true Chr04: 64693118-64706339 Sorghum bicolor
Sobic.004G310200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 64693118-64703117 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192658 5267 Panicoideae View MSA
124583539 5269 Grass View MSA
122046776 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.874        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.005     Low Low
cufflinks 0.341        
cufflinks 0.071     Low  
cufflinks 0.09     Low  
cufflinks 0.061     Low  
cufflinks 0.046     Low  
cufflinks 0.039     Low  
cufflinks 4.389       High
cufflinks 3.07       High
cufflinks 0.132        
cufflinks 4.297       High
cufflinks 0.142        
cufflinks 0.008     Low Low
cufflinks 0.083     Low  
cufflinks 0.049     Low  
cufflinks 0.359        
cufflinks 0.1     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.242       High
cufflinks 2.694       High
cufflinks 2.537       High
cufflinks 0.019     Low Low
cufflinks 0.01     Low Low
cufflinks 2.908       High
cufflinks 0.019     Low Low
cufflinks 0.056     Low  
cufflinks 0.332        

0 Strain