Gene : Sobic.004G301900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Genomic Order:  3166
Name:  ? Sobic.004G301900 Secondary Identifier:  ? PAC:37933368
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G301900 0.5kb upstream 0.5kb upstream 5759 true Chr04: 64054912-64060670 Sorghum bicolor
Sobic.004G301900 0.5kb upstream 0.5kb upstream 500 false Chr04: 64060171-64060670 Sorghum bicolor
Sobic.004G301900 0.5kb downstream 0.5kb downstream 5759 true Chr04: 64054412-64060170 Sorghum bicolor
Sobic.004G301900 0.5kb downstream 0.5kb downstream 500 false Chr04: 64054412-64054911 Sorghum bicolor
Sobic.004G301900 1.0kb upstream 1.0kb upstream 6259 true Chr04: 64054912-64061170 Sorghum bicolor
Sobic.004G301900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 64060171-64061170 Sorghum bicolor
Sobic.004G301900 1.0kb downstream 1.0kb downstream 6259 true Chr04: 64053912-64060170 Sorghum bicolor
Sobic.004G301900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 64053912-64054911 Sorghum bicolor
Sobic.004G301900 2.0kb upstream 2.0kb upstream 7259 true Chr04: 64054912-64062170 Sorghum bicolor
Sobic.004G301900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 64060171-64062170 Sorghum bicolor
Sobic.004G301900 2.0kb downstream 2.0kb downstream 7259 true Chr04: 64052912-64060170 Sorghum bicolor
Sobic.004G301900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 64052912-64054911 Sorghum bicolor
Sobic.004G301900 5.0kb upstream 5.0kb upstream 10259 true Chr04: 64054912-64065170 Sorghum bicolor
Sobic.004G301900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 64060171-64065170 Sorghum bicolor
Sobic.004G301900 5.0kb downstream 5.0kb downstream 10259 true Chr04: 64049912-64060170 Sorghum bicolor
Sobic.004G301900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 64049912-64054911 Sorghum bicolor
Sobic.004G301900 10.0kb upstream 10.0kb upstream 15259 true Chr04: 64054912-64070170 Sorghum bicolor
Sobic.004G301900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 64060171-64070170 Sorghum bicolor
Sobic.004G301900 10.0kb downstream 10.0kb downstream 15259 true Chr04: 64044912-64060170 Sorghum bicolor
Sobic.004G301900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 64044912-64054911 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185096 5267 Panicoideae View MSA
124578887 5269 Grass View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.447        
cufflinks 10.025     High  
cufflinks 19.084     High High
cufflinks 17.236     High High
cufflinks 13.139     High  
cufflinks 8.412       Low
cufflinks 9.132        
cufflinks 7.574       Low
cufflinks 12.426     High  
cufflinks 12.55     High  
cufflinks 12.06     High  
cufflinks 12.555     High  
cufflinks 14.694     High High
cufflinks 12.804     High  
cufflinks 12.444     High  
cufflinks 10.54     High  
cufflinks 9.025        
cufflinks 8.637       Low
cufflinks 12.503     High  
cufflinks 10.297        
cufflinks 9.844        
cufflinks 9.932        
cufflinks 11.885     High  
cufflinks 12.613     High  
cufflinks 14.216     High  
cufflinks 7.585     High Low
cufflinks 16.787     High High
cufflinks 7.466       Low
cufflinks 8.311       Low
cufflinks 14.277     High  

0 Strain