Gene : Sobic.009G189000 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  1953
Name:  ? Sobic.009G189000 Secondary Identifier:  ? PAC:37921519
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G189000 0.5kb upstream 0.5kb upstream 3721 true Chr09: 54107166-54110886 Sorghum bicolor
Sobic.009G189000 0.5kb upstream 0.5kb upstream 500 false Chr09: 54110387-54110886 Sorghum bicolor
Sobic.009G189000 0.5kb downstream 0.5kb downstream 3721 true Chr09: 54106666-54110386 Sorghum bicolor
Sobic.009G189000 0.5kb downstream 0.5kb downstream 500 false Chr09: 54106666-54107165 Sorghum bicolor
Sobic.009G189000 1.0kb upstream 1.0kb upstream 4221 true Chr09: 54107166-54111386 Sorghum bicolor
Sobic.009G189000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 54110387-54111386 Sorghum bicolor
Sobic.009G189000 1.0kb downstream 1.0kb downstream 4221 true Chr09: 54106166-54110386 Sorghum bicolor
Sobic.009G189000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 54106166-54107165 Sorghum bicolor
Sobic.009G189000 2.0kb upstream 2.0kb upstream 5221 true Chr09: 54107166-54112386 Sorghum bicolor
Sobic.009G189000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 54110387-54112386 Sorghum bicolor
Sobic.009G189000 2.0kb downstream 2.0kb downstream 5221 true Chr09: 54105166-54110386 Sorghum bicolor
Sobic.009G189000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 54105166-54107165 Sorghum bicolor
Sobic.009G189000 5.0kb upstream 5.0kb upstream 8221 true Chr09: 54107166-54115386 Sorghum bicolor
Sobic.009G189000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 54110387-54115386 Sorghum bicolor
Sobic.009G189000 5.0kb downstream 5.0kb downstream 8221 true Chr09: 54102166-54110386 Sorghum bicolor
Sobic.009G189000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 54102166-54107165 Sorghum bicolor
Sobic.009G189000 10.0kb upstream 10.0kb upstream 13221 true Chr09: 54107166-54120386 Sorghum bicolor
Sobic.009G189000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 54110387-54120386 Sorghum bicolor
Sobic.009G189000 10.0kb downstream 10.0kb downstream 13221 true Chr09: 54097166-54110386 Sorghum bicolor
Sobic.009G189000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 54097166-54107165 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026569 5273 Angiosperm View MSA
122181454 5267 Panicoideae View MSA
124577465 5269 Grass View MSA
121346069 5274 Embryophyte View MSA
123380318 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.044        
cufflinks 22.804     High High
cufflinks 7.419        
cufflinks 15.775     High High
cufflinks 1.093        
cufflinks 4.265        
cufflinks 3.83        
cufflinks 8.19       High
cufflinks 0.538        
cufflinks 0.933        
cufflinks 0.742        
cufflinks 0.532        
cufflinks 0.611        
cufflinks 0.727        
cufflinks 1.546        
cufflinks 47.786     High High
cufflinks 4.417        
cufflinks 4.586        
cufflinks 24.233     High High
cufflinks 2.073        
cufflinks 2.196        
cufflinks 0.546        
cufflinks 0.582        
cufflinks 0.441       Low
cufflinks 34.72     High High
cufflinks 19.088     High High
cufflinks 0.502        
cufflinks 1.294        
cufflinks 2.701        
cufflinks 1.984        

0 Strain