Gene : Sobic.009G190500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11073//PTHR11073:SF15 - CALRETICULIN AND CALNEXIN // SUBFAMILY NOT NAMED Genomic Order:  1968
Name:  ? Sobic.009G190500 Secondary Identifier:  ? PAC:37920897
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G190500 0.5kb upstream 0.5kb upstream 5404 true Chr09: 54246803-54252206 Sorghum bicolor
Sobic.009G190500 0.5kb upstream 0.5kb upstream 500 false Chr09: 54246803-54247302 Sorghum bicolor
Sobic.009G190500 0.5kb downstream 0.5kb downstream 5404 true Chr09: 54247303-54252706 Sorghum bicolor
Sobic.009G190500 0.5kb downstream 0.5kb downstream 500 false Chr09: 54252207-54252706 Sorghum bicolor
Sobic.009G190500 1.0kb upstream 1.0kb upstream 5904 true Chr09: 54246303-54252206 Sorghum bicolor
Sobic.009G190500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 54246303-54247302 Sorghum bicolor
Sobic.009G190500 1.0kb downstream 1.0kb downstream 5904 true Chr09: 54247303-54253206 Sorghum bicolor
Sobic.009G190500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 54252207-54253206 Sorghum bicolor
Sobic.009G190500 2.0kb upstream 2.0kb upstream 6904 true Chr09: 54245303-54252206 Sorghum bicolor
Sobic.009G190500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 54245303-54247302 Sorghum bicolor
Sobic.009G190500 2.0kb downstream 2.0kb downstream 6904 true Chr09: 54247303-54254206 Sorghum bicolor
Sobic.009G190500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 54252207-54254206 Sorghum bicolor
Sobic.009G190500 5.0kb upstream 5.0kb upstream 9904 true Chr09: 54242303-54252206 Sorghum bicolor
Sobic.009G190500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 54242303-54247302 Sorghum bicolor
Sobic.009G190500 5.0kb downstream 5.0kb downstream 9904 true Chr09: 54247303-54257206 Sorghum bicolor
Sobic.009G190500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 54252207-54257206 Sorghum bicolor
Sobic.009G190500 10.0kb upstream 10.0kb upstream 14904 true Chr09: 54237303-54252206 Sorghum bicolor
Sobic.009G190500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 54237303-54247302 Sorghum bicolor
Sobic.009G190500 10.0kb downstream 10.0kb downstream 14904 true Chr09: 54247303-54262206 Sorghum bicolor
Sobic.009G190500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 54252207-54262206 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176399 5267 Panicoideae View MSA
124576591 5269 Grass View MSA
122048001 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.076     High Low
cufflinks 29.797     High  
cufflinks 73.736     High High
cufflinks 80.259     High High
cufflinks 16.897     High  
cufflinks 24.973     High  
cufflinks 23.657     High  
cufflinks 30.346     High  
cufflinks 39.112     High  
cufflinks 29.016     High  
cufflinks 26.262     High  
cufflinks 24.511     High  
cufflinks 23.061     High  
cufflinks 28.926     High  
cufflinks 11.818       Low
cufflinks 62.116     High High
cufflinks 26.064     High  
cufflinks 25.118     High  
cufflinks 82.121     High High
cufflinks 35.411     High  
cufflinks 9.532       Low
cufflinks 27.547     High  
cufflinks 31.518     High  
cufflinks 25.211     High  
cufflinks 65.773     High High
cufflinks 25.181     High  
cufflinks 22.992     High  
cufflinks 7.695       Low
cufflinks 17.612     High  
cufflinks 13.375     High Low

0 Strain