Gene : Sobic.009G191800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10302//PTHR10302:SF6 - SINGLE-STRANDED DNA-BINDING PROTEIN // SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL Genomic Order:  1982
Name:  ? Sobic.009G191800 Secondary Identifier:  ? PAC:37922657
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G191800 0.5kb upstream 0.5kb upstream 4224 true Chr09: 54372793-54377016 Sorghum bicolor
Sobic.009G191800 0.5kb upstream 0.5kb upstream 500 false Chr09: 54376517-54377016 Sorghum bicolor
Sobic.009G191800 0.5kb downstream 0.5kb downstream 4224 true Chr09: 54372293-54376516 Sorghum bicolor
Sobic.009G191800 0.5kb downstream 0.5kb downstream 500 false Chr09: 54372293-54372792 Sorghum bicolor
Sobic.009G191800 1.0kb upstream 1.0kb upstream 4724 true Chr09: 54372793-54377516 Sorghum bicolor
Sobic.009G191800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 54376517-54377516 Sorghum bicolor
Sobic.009G191800 1.0kb downstream 1.0kb downstream 4724 true Chr09: 54371793-54376516 Sorghum bicolor
Sobic.009G191800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 54371793-54372792 Sorghum bicolor
Sobic.009G191800 2.0kb upstream 2.0kb upstream 5724 true Chr09: 54372793-54378516 Sorghum bicolor
Sobic.009G191800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 54376517-54378516 Sorghum bicolor
Sobic.009G191800 2.0kb downstream 2.0kb downstream 5724 true Chr09: 54370793-54376516 Sorghum bicolor
Sobic.009G191800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 54370793-54372792 Sorghum bicolor
Sobic.009G191800 5.0kb upstream 5.0kb upstream 8724 true Chr09: 54372793-54381516 Sorghum bicolor
Sobic.009G191800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 54376517-54381516 Sorghum bicolor
Sobic.009G191800 5.0kb downstream 5.0kb downstream 8724 true Chr09: 54367793-54376516 Sorghum bicolor
Sobic.009G191800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 54367793-54372792 Sorghum bicolor
Sobic.009G191800 10.0kb upstream 10.0kb upstream 13724 true Chr09: 54372793-54386516 Sorghum bicolor
Sobic.009G191800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 54376517-54386516 Sorghum bicolor
Sobic.009G191800 10.0kb downstream 10.0kb downstream 13724 true Chr09: 54362793-54376516 Sorghum bicolor
Sobic.009G191800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 54362793-54372792 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188381 5267 Panicoideae View MSA
124573761 5269 Grass View MSA
122047632 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.002       High
cufflinks 0.031     Low Low
cufflinks 0.22        
cufflinks 0.287        
cufflinks 0.39        
cufflinks 0.215        
cufflinks 0.39        
cufflinks 0.056     Low Low
cufflinks 0.396        
cufflinks 0.504        
cufflinks 0.57        
cufflinks 0.371        
cufflinks 0.373        
cufflinks 0.369        
cufflinks 0.381        
cufflinks 0.122       Low
cufflinks 0.417        
cufflinks 0.501        
cufflinks 0.058     Low Low
cufflinks 0.358        
cufflinks 1.014       High
cufflinks 0.791       High
cufflinks 0.586        
cufflinks 0.666        
cufflinks 0.06       Low
cufflinks 0.028     Low Low
cufflinks 0.372        
cufflinks 0.28        
cufflinks 0.206        
cufflinks 0.545        

0 Strain