Gene : Sobic.004G297000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31296:SF1 - UPF0565 PROTEIN C2ORF69 Genomic Order:  3115
Name:  ? Sobic.004G297000 Secondary Identifier:  ? PAC:37931517
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G297000 0.5kb upstream 0.5kb upstream 4789 true Chr04: 63656718-63661506 Sorghum bicolor
Sobic.004G297000 0.5kb upstream 0.5kb upstream 500 false Chr04: 63661007-63661506 Sorghum bicolor
Sobic.004G297000 0.5kb downstream 0.5kb downstream 4789 true Chr04: 63656218-63661006 Sorghum bicolor
Sobic.004G297000 0.5kb downstream 0.5kb downstream 500 false Chr04: 63656218-63656717 Sorghum bicolor
Sobic.004G297000 1.0kb upstream 1.0kb upstream 5289 true Chr04: 63656718-63662006 Sorghum bicolor
Sobic.004G297000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 63661007-63662006 Sorghum bicolor
Sobic.004G297000 1.0kb downstream 1.0kb downstream 5289 true Chr04: 63655718-63661006 Sorghum bicolor
Sobic.004G297000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 63655718-63656717 Sorghum bicolor
Sobic.004G297000 2.0kb upstream 2.0kb upstream 6289 true Chr04: 63656718-63663006 Sorghum bicolor
Sobic.004G297000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 63661007-63663006 Sorghum bicolor
Sobic.004G297000 2.0kb downstream 2.0kb downstream 6289 true Chr04: 63654718-63661006 Sorghum bicolor
Sobic.004G297000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 63654718-63656717 Sorghum bicolor
Sobic.004G297000 5.0kb upstream 5.0kb upstream 9289 true Chr04: 63656718-63666006 Sorghum bicolor
Sobic.004G297000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 63661007-63666006 Sorghum bicolor
Sobic.004G297000 5.0kb downstream 5.0kb downstream 9289 true Chr04: 63651718-63661006 Sorghum bicolor
Sobic.004G297000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 63651718-63656717 Sorghum bicolor
Sobic.004G297000 10.0kb upstream 10.0kb upstream 14289 true Chr04: 63656718-63671006 Sorghum bicolor
Sobic.004G297000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 63661007-63671006 Sorghum bicolor
Sobic.004G297000 10.0kb downstream 10.0kb downstream 14289 true Chr04: 63646718-63661006 Sorghum bicolor
Sobic.004G297000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 63646718-63656717 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196035 5267 Panicoideae View MSA
124571542 5269 Grass View MSA
122048933 5273 Angiosperm View MSA
121346083 5274 Embryophyte View MSA
123425579 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.082     Low  
cufflinks 0.021     Low Low
cufflinks 0.053     Low  
cufflinks 0.083        
cufflinks 0.053     Low  
cufflinks 0.11       High
cufflinks 0.032     Low  
cufflinks 0.019     Low Low
cufflinks 0.154       High
cufflinks 0.111       High
cufflinks 0.041     Low  
cufflinks 0.059     Low  
cufflinks 0.056     Low  
cufflinks 0.056     Low  
cufflinks 0.071     Low  
cufflinks 0.054     Low  
cufflinks 0.037     Low  
cufflinks 0.039     Low  
cufflinks 0.032     Low  
cufflinks 0.069     Low  
cufflinks 0.111       High
cufflinks 0.04     Low  
cufflinks 0.039     Low  
cufflinks 0.045     Low  
cufflinks 0.045     Low  
cufflinks 0.019     Low Low
cufflinks 0.064     Low  
cufflinks 0.152       High
cufflinks 0.023     Low Low
cufflinks 0.077     Low  

0 Strain