Gene : Sobic.009G193500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12303:SF6 - UPF0586 PROTEIN C9ORF41 Genomic Order:  1999
Name:  ? Sobic.009G193500 Secondary Identifier:  ? PAC:37919234
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G193500 0.5kb upstream 0.5kb upstream 9095 true Chr09: 54504009-54513103 Sorghum bicolor
Sobic.009G193500 0.5kb upstream 0.5kb upstream 500 false Chr09: 54504009-54504508 Sorghum bicolor
Sobic.009G193500 0.5kb downstream 0.5kb downstream 9095 true Chr09: 54504509-54513603 Sorghum bicolor
Sobic.009G193500 0.5kb downstream 0.5kb downstream 500 false Chr09: 54513104-54513603 Sorghum bicolor
Sobic.009G193500 1.0kb upstream 1.0kb upstream 9595 true Chr09: 54503509-54513103 Sorghum bicolor
Sobic.009G193500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 54503509-54504508 Sorghum bicolor
Sobic.009G193500 1.0kb downstream 1.0kb downstream 9595 true Chr09: 54504509-54514103 Sorghum bicolor
Sobic.009G193500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 54513104-54514103 Sorghum bicolor
Sobic.009G193500 2.0kb upstream 2.0kb upstream 10595 true Chr09: 54502509-54513103 Sorghum bicolor
Sobic.009G193500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 54502509-54504508 Sorghum bicolor
Sobic.009G193500 2.0kb downstream 2.0kb downstream 10595 true Chr09: 54504509-54515103 Sorghum bicolor
Sobic.009G193500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 54513104-54515103 Sorghum bicolor
Sobic.009G193500 5.0kb upstream 5.0kb upstream 13595 true Chr09: 54499509-54513103 Sorghum bicolor
Sobic.009G193500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 54499509-54504508 Sorghum bicolor
Sobic.009G193500 5.0kb downstream 5.0kb downstream 13595 true Chr09: 54504509-54518103 Sorghum bicolor
Sobic.009G193500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 54513104-54518103 Sorghum bicolor
Sobic.009G193500 10.0kb upstream 10.0kb upstream 18595 true Chr09: 54494509-54513103 Sorghum bicolor
Sobic.009G193500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 54494509-54504508 Sorghum bicolor
Sobic.009G193500 10.0kb downstream 10.0kb downstream 18595 true Chr09: 54504509-54523103 Sorghum bicolor
Sobic.009G193500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 54513104-54523103 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190676 5267 Panicoideae View MSA
124574379 5269 Grass View MSA
122046455 5273 Angiosperm View MSA
121344322 5274 Embryophyte View MSA
123425361 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.019        
cufflinks 0.927       Low
cufflinks 2.054        
cufflinks 6.005       High
cufflinks 3.238        
cufflinks 4.166        
cufflinks 1.821       Low
cufflinks 1.739       Low
cufflinks 5.174       High
cufflinks 5.485       High
cufflinks 3.962        
cufflinks 3.856        
cufflinks 3.469        
cufflinks 3.33        
cufflinks 2.837        
cufflinks 1.963        
cufflinks 1.981        
cufflinks 1.865       Low
cufflinks 1.899       Low
cufflinks 3.353        
cufflinks 3.271        
cufflinks 3.803        
cufflinks 3.32        
cufflinks 3.154        
cufflinks 1.885       Low
cufflinks 1.102       Low
cufflinks 3.79        
cufflinks 1.797       Low
cufflinks 2.407        
cufflinks 3.8        

0 Strain