Gene : Sobic.009G192300 S. bicolor v3.1.1
Defline:  (1 of 8) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Genomic Order:  1987
Name:  ? Sobic.009G192300 Secondary Identifier:  ? PAC:37920053
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G192300 0.5kb upstream 0.5kb upstream 9502 true Chr09: 54411284-54420785 Sorghum bicolor
Sobic.009G192300 0.5kb upstream 0.5kb upstream 500 false Chr09: 54411284-54411783 Sorghum bicolor
Sobic.009G192300 0.5kb downstream 0.5kb downstream 9502 true Chr09: 54411784-54421285 Sorghum bicolor
Sobic.009G192300 0.5kb downstream 0.5kb downstream 500 false Chr09: 54420786-54421285 Sorghum bicolor
Sobic.009G192300 1.0kb upstream 1.0kb upstream 10002 true Chr09: 54410784-54420785 Sorghum bicolor
Sobic.009G192300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 54410784-54411783 Sorghum bicolor
Sobic.009G192300 1.0kb downstream 1.0kb downstream 10002 true Chr09: 54411784-54421785 Sorghum bicolor
Sobic.009G192300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 54420786-54421785 Sorghum bicolor
Sobic.009G192300 2.0kb upstream 2.0kb upstream 11002 true Chr09: 54409784-54420785 Sorghum bicolor
Sobic.009G192300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 54409784-54411783 Sorghum bicolor
Sobic.009G192300 2.0kb downstream 2.0kb downstream 11002 true Chr09: 54411784-54422785 Sorghum bicolor
Sobic.009G192300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 54420786-54422785 Sorghum bicolor
Sobic.009G192300 5.0kb upstream 5.0kb upstream 14002 true Chr09: 54406784-54420785 Sorghum bicolor
Sobic.009G192300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 54406784-54411783 Sorghum bicolor
Sobic.009G192300 5.0kb downstream 5.0kb downstream 14002 true Chr09: 54411784-54425785 Sorghum bicolor
Sobic.009G192300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 54420786-54425785 Sorghum bicolor
Sobic.009G192300 10.0kb upstream 10.0kb upstream 19002 true Chr09: 54401784-54420785 Sorghum bicolor
Sobic.009G192300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 54401784-54411783 Sorghum bicolor
Sobic.009G192300 10.0kb downstream 10.0kb downstream 19002 true Chr09: 54411784-54430785 Sorghum bicolor
Sobic.009G192300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 54420786-54430785 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182916 5267 Panicoideae View MSA
124571102 5269 Grass View MSA
122045970 5273 Angiosperm View MSA
121346163 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.625        
cufflinks 3.347       Low
cufflinks 4.652        
cufflinks 4.564        
cufflinks 7.066       High
cufflinks 5.647        
cufflinks 4.301        
cufflinks 3.119       Low
cufflinks 6.338       High
cufflinks 6.337       High
cufflinks 4.238        
cufflinks 4.408        
cufflinks 6.756       High
cufflinks 4.347        
cufflinks 5.656        
cufflinks 3.075       Low
cufflinks 4.1        
cufflinks 4.411        
cufflinks 4.505        
cufflinks 3.91        
cufflinks 7.545       High
cufflinks 4.794        
cufflinks 4.52        
cufflinks 4.722        
cufflinks 3.962        
cufflinks 3.433       Low
cufflinks 4.23        
cufflinks 4.096        
cufflinks 4.51        
cufflinks 5.048        

0 Strain