Gene : Sobic.009G194000 S. bicolor v3.1.1
Defline:  (1 of 1) K05286 - phosphatidylinositol glycan, class B (PIGB) Genomic Order:  2003
Name:  ? Sobic.009G194000 Secondary Identifier:  ? PAC:37922456
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G194000 0.5kb upstream 0.5kb upstream 4626 true Chr09: 54536660-54541285 Sorghum bicolor
Sobic.009G194000 0.5kb upstream 0.5kb upstream 500 false Chr09: 54540786-54541285 Sorghum bicolor
Sobic.009G194000 0.5kb downstream 0.5kb downstream 4626 true Chr09: 54536160-54540785 Sorghum bicolor
Sobic.009G194000 0.5kb downstream 0.5kb downstream 500 false Chr09: 54536160-54536659 Sorghum bicolor
Sobic.009G194000 1.0kb upstream 1.0kb upstream 5126 true Chr09: 54536660-54541785 Sorghum bicolor
Sobic.009G194000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 54540786-54541785 Sorghum bicolor
Sobic.009G194000 1.0kb downstream 1.0kb downstream 5126 true Chr09: 54535660-54540785 Sorghum bicolor
Sobic.009G194000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 54535660-54536659 Sorghum bicolor
Sobic.009G194000 2.0kb upstream 2.0kb upstream 6126 true Chr09: 54536660-54542785 Sorghum bicolor
Sobic.009G194000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 54540786-54542785 Sorghum bicolor
Sobic.009G194000 2.0kb downstream 2.0kb downstream 6126 true Chr09: 54534660-54540785 Sorghum bicolor
Sobic.009G194000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 54534660-54536659 Sorghum bicolor
Sobic.009G194000 5.0kb upstream 5.0kb upstream 9126 true Chr09: 54536660-54545785 Sorghum bicolor
Sobic.009G194000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 54540786-54545785 Sorghum bicolor
Sobic.009G194000 5.0kb downstream 5.0kb downstream 9126 true Chr09: 54531660-54540785 Sorghum bicolor
Sobic.009G194000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 54531660-54536659 Sorghum bicolor
Sobic.009G194000 10.0kb upstream 10.0kb upstream 14126 true Chr09: 54536660-54550785 Sorghum bicolor
Sobic.009G194000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 54540786-54550785 Sorghum bicolor
Sobic.009G194000 10.0kb downstream 10.0kb downstream 14126 true Chr09: 54526660-54540785 Sorghum bicolor
Sobic.009G194000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 54526660-54536659 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189205 5267 Panicoideae View MSA
124568252 5269 Grass View MSA
122042871 5273 Angiosperm View MSA
121346274 5274 Embryophyte View MSA
123425289 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.307        
cufflinks 0.232       Low
cufflinks 0.719        
cufflinks 1.429        
cufflinks 1.758        
cufflinks 1.834        
cufflinks 0.89        
cufflinks 0.326       Low
cufflinks 2.134       High
cufflinks 2.256       High
cufflinks 0.889        
cufflinks 1.239        
cufflinks 1.704        
cufflinks 1.052        
cufflinks 1.612        
cufflinks 0.649        
cufflinks 0.917        
cufflinks 0.85        
cufflinks 0.649        
cufflinks 1.308        
cufflinks 2.475       High
cufflinks 1.325        
cufflinks 0.957        
cufflinks 1.043        
cufflinks 0.543       Low
cufflinks 0.231       Low
cufflinks 0.86        
cufflinks 0.636        
cufflinks 0.747        
cufflinks 1.765        

0 Strain