Gene : Sobic.004G349000 S. bicolor v3.1.1
Defline:  (1 of 1) 1.14.99.29 - Deoxyhypusine monooxygenase / DOHH Genomic Order:  3663
Name:  ? Sobic.004G349000 Secondary Identifier:  ? PAC:37931512
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5905 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G349000 0.5kb upstream 0.5kb upstream 3555 true Chr04: 67780409-67783963 Sorghum bicolor
Sobic.004G349000 0.5kb upstream 0.5kb upstream 500 false Chr04: 67783464-67783963 Sorghum bicolor
Sobic.004G349000 0.5kb downstream 0.5kb downstream 3555 true Chr04: 67779909-67783463 Sorghum bicolor
Sobic.004G349000 0.5kb downstream 0.5kb downstream 500 false Chr04: 67779909-67780408 Sorghum bicolor
Sobic.004G349000 1.0kb upstream 1.0kb upstream 4055 true Chr04: 67780409-67784463 Sorghum bicolor
Sobic.004G349000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67783464-67784463 Sorghum bicolor
Sobic.004G349000 1.0kb downstream 1.0kb downstream 4055 true Chr04: 67779409-67783463 Sorghum bicolor
Sobic.004G349000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 67779409-67780408 Sorghum bicolor
Sobic.004G349000 2.0kb upstream 2.0kb upstream 5055 true Chr04: 67780409-67785463 Sorghum bicolor
Sobic.004G349000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67783464-67785463 Sorghum bicolor
Sobic.004G349000 2.0kb downstream 2.0kb downstream 5055 true Chr04: 67778409-67783463 Sorghum bicolor
Sobic.004G349000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 67778409-67780408 Sorghum bicolor
Sobic.004G349000 5.0kb upstream 5.0kb upstream 8055 true Chr04: 67780409-67788463 Sorghum bicolor
Sobic.004G349000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67783464-67788463 Sorghum bicolor
Sobic.004G349000 5.0kb downstream 5.0kb downstream 8055 true Chr04: 67775409-67783463 Sorghum bicolor
Sobic.004G349000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 67775409-67780408 Sorghum bicolor
Sobic.004G349000 10.0kb upstream 10.0kb upstream 13055 true Chr04: 67780409-67793463 Sorghum bicolor
Sobic.004G349000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67783464-67793463 Sorghum bicolor
Sobic.004G349000 10.0kb downstream 10.0kb downstream 13055 true Chr04: 67770409-67783463 Sorghum bicolor
Sobic.004G349000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 67770409-67780408 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183643 5267 Panicoideae View MSA
124573360 5269 Grass View MSA
122045074 5273 Angiosperm View MSA
121346914 5274 Embryophyte View MSA
123424713 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.098     High High
cufflinks 1.119       Low
cufflinks 2.669        
cufflinks 6.091       High
cufflinks 2.368        
cufflinks 3.54        
cufflinks 1.12       Low
cufflinks 0.908       Low
cufflinks 4.791        
cufflinks 5.808       High
cufflinks 2.083        
cufflinks 1.525        
cufflinks 3.9        
cufflinks 2.159        
cufflinks 3.182        
cufflinks 1.682        
cufflinks 1.113       Low
cufflinks 1.164       Low
cufflinks 1.088       Low
cufflinks 1.661        
cufflinks 2.267        
cufflinks 2.488        
cufflinks 1.866        
cufflinks 1.929        
cufflinks 1.023       Low
cufflinks 0.986       Low
cufflinks 2.615        
cufflinks 45.667     High High
cufflinks 1.364        
cufflinks 3.683        

0 Strain