Gene : Sobic.004G347800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF23 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3649
Name:  ? Sobic.004G347800 Secondary Identifier:  ? PAC:37931855
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G347800 0.5kb upstream 0.5kb upstream 5292 true Chr04: 67704489-67709780 Sorghum bicolor
Sobic.004G347800 0.5kb upstream 0.5kb upstream 500 false Chr04: 67709281-67709780 Sorghum bicolor
Sobic.004G347800 0.5kb downstream 0.5kb downstream 5292 true Chr04: 67703989-67709280 Sorghum bicolor
Sobic.004G347800 0.5kb downstream 0.5kb downstream 500 false Chr04: 67703989-67704488 Sorghum bicolor
Sobic.004G347800 1.0kb upstream 1.0kb upstream 5792 true Chr04: 67704489-67710280 Sorghum bicolor
Sobic.004G347800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67709281-67710280 Sorghum bicolor
Sobic.004G347800 1.0kb downstream 1.0kb downstream 5792 true Chr04: 67703489-67709280 Sorghum bicolor
Sobic.004G347800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 67703489-67704488 Sorghum bicolor
Sobic.004G347800 2.0kb upstream 2.0kb upstream 6792 true Chr04: 67704489-67711280 Sorghum bicolor
Sobic.004G347800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67709281-67711280 Sorghum bicolor
Sobic.004G347800 2.0kb downstream 2.0kb downstream 6792 true Chr04: 67702489-67709280 Sorghum bicolor
Sobic.004G347800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 67702489-67704488 Sorghum bicolor
Sobic.004G347800 5.0kb upstream 5.0kb upstream 9792 true Chr04: 67704489-67714280 Sorghum bicolor
Sobic.004G347800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67709281-67714280 Sorghum bicolor
Sobic.004G347800 5.0kb downstream 5.0kb downstream 9792 true Chr04: 67699489-67709280 Sorghum bicolor
Sobic.004G347800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 67699489-67704488 Sorghum bicolor
Sobic.004G347800 10.0kb upstream 10.0kb upstream 14792 true Chr04: 67704489-67719280 Sorghum bicolor
Sobic.004G347800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67709281-67719280 Sorghum bicolor
Sobic.004G347800 10.0kb downstream 10.0kb downstream 14792 true Chr04: 67694489-67709280 Sorghum bicolor
Sobic.004G347800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 67694489-67704488 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180936 5267 Panicoideae View MSA
124577509 5269 Grass View MSA
122042328 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.341        
cufflinks 25.93     High High
cufflinks 21.339     High High
cufflinks 13.711     High  
cufflinks 2.399       Low
cufflinks 37.457     High High
cufflinks 12.681     High  
cufflinks 12.96     High  
cufflinks 22.507     High High
cufflinks 26.361     High High
cufflinks 5.713        
cufflinks 3.668        
cufflinks 24.11     High High
cufflinks 6.266        
cufflinks 17.057     High  
cufflinks 25.305     High High
cufflinks 11.487     High  
cufflinks 12.273     High  
cufflinks 30.089     High High
cufflinks 10.826        
cufflinks 1.453       Low
cufflinks 3.072       Low
cufflinks 3.051       Low
cufflinks 2.971       Low
cufflinks 27.89     High High
cufflinks 26.53     High High
cufflinks 5.195        
cufflinks 2.43       Low
cufflinks 4.274        
cufflinks 10.395        

0 Strain