Gene : Sobic.004G348100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR20922//PTHR20922:SF13 - UNCHARACTERIZED // DNL-TYPE ZINC FINGER PROTEIN Genomic Order:  3654
Name:  ? Sobic.004G348100 Secondary Identifier:  ? PAC:37932851
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G348100 0.5kb upstream 0.5kb upstream 8599 true Chr04: 67731503-67740101 Sorghum bicolor
Sobic.004G348100 0.5kb upstream 0.5kb upstream 500 false Chr04: 67739602-67740101 Sorghum bicolor
Sobic.004G348100 0.5kb downstream 0.5kb downstream 8599 true Chr04: 67731003-67739601 Sorghum bicolor
Sobic.004G348100 0.5kb downstream 0.5kb downstream 500 false Chr04: 67731003-67731502 Sorghum bicolor
Sobic.004G348100 1.0kb upstream 1.0kb upstream 9099 true Chr04: 67731503-67740601 Sorghum bicolor
Sobic.004G348100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67739602-67740601 Sorghum bicolor
Sobic.004G348100 1.0kb downstream 1.0kb downstream 9099 true Chr04: 67730503-67739601 Sorghum bicolor
Sobic.004G348100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 67730503-67731502 Sorghum bicolor
Sobic.004G348100 2.0kb upstream 2.0kb upstream 10099 true Chr04: 67731503-67741601 Sorghum bicolor
Sobic.004G348100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67739602-67741601 Sorghum bicolor
Sobic.004G348100 2.0kb downstream 2.0kb downstream 10099 true Chr04: 67729503-67739601 Sorghum bicolor
Sobic.004G348100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 67729503-67731502 Sorghum bicolor
Sobic.004G348100 5.0kb upstream 5.0kb upstream 13099 true Chr04: 67731503-67744601 Sorghum bicolor
Sobic.004G348100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67739602-67744601 Sorghum bicolor
Sobic.004G348100 5.0kb downstream 5.0kb downstream 13099 true Chr04: 67726503-67739601 Sorghum bicolor
Sobic.004G348100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 67726503-67731502 Sorghum bicolor
Sobic.004G348100 10.0kb upstream 10.0kb upstream 18099 true Chr04: 67731503-67749601 Sorghum bicolor
Sobic.004G348100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67739602-67749601 Sorghum bicolor
Sobic.004G348100 10.0kb downstream 10.0kb downstream 18099 true Chr04: 67721503-67739601 Sorghum bicolor
Sobic.004G348100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 67721503-67731502 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175681 5267 Panicoideae View MSA
124572960 5269 Grass View MSA
122044958 5273 Angiosperm View MSA
121348718 5274 Embryophyte View MSA
123424658 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.316       High
cufflinks 0.211       Low
cufflinks 0.467        
cufflinks 0.669        
cufflinks 0.318       Low
cufflinks 0.752        
cufflinks 0.454        
cufflinks 0.303       Low
cufflinks 0.612        
cufflinks 0.625        
cufflinks 0.588        
cufflinks 0.921       High
cufflinks 0.399        
cufflinks 0.753        
cufflinks 0.406        
cufflinks 0.447        
cufflinks 0.565        
cufflinks 0.484        
cufflinks 0.622        
cufflinks 0.769        
cufflinks 0.555        
cufflinks 0.572        
cufflinks 0.7        
cufflinks 0.623        
cufflinks 0.483        
cufflinks 0.187       Low
cufflinks 0.477        
cufflinks 1.256       High
cufflinks 0.482        
cufflinks 0.685        

0 Strain