Gene : Sobic.004G347100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22883//PTHR22883:SF19 - ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN // PROTEIN S-ACYLTRANSFERASE 15-RELATED Genomic Order:  3642
Name:  ? Sobic.004G347100 Secondary Identifier:  ? PAC:37930350
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G347100 0.5kb upstream 0.5kb upstream 3255 true Chr04: 67661468-67664722 Sorghum bicolor
Sobic.004G347100 0.5kb upstream 0.5kb upstream 500 false Chr04: 67661468-67661967 Sorghum bicolor
Sobic.004G347100 0.5kb downstream 0.5kb downstream 3255 true Chr04: 67661968-67665222 Sorghum bicolor
Sobic.004G347100 0.5kb downstream 0.5kb downstream 500 false Chr04: 67664723-67665222 Sorghum bicolor
Sobic.004G347100 1.0kb upstream 1.0kb upstream 3755 true Chr04: 67660968-67664722 Sorghum bicolor
Sobic.004G347100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67660968-67661967 Sorghum bicolor
Sobic.004G347100 1.0kb downstream 1.0kb downstream 3755 true Chr04: 67661968-67665722 Sorghum bicolor
Sobic.004G347100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 67664723-67665722 Sorghum bicolor
Sobic.004G347100 2.0kb upstream 2.0kb upstream 4755 true Chr04: 67659968-67664722 Sorghum bicolor
Sobic.004G347100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67659968-67661967 Sorghum bicolor
Sobic.004G347100 2.0kb downstream 2.0kb downstream 4755 true Chr04: 67661968-67666722 Sorghum bicolor
Sobic.004G347100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 67664723-67666722 Sorghum bicolor
Sobic.004G347100 5.0kb upstream 5.0kb upstream 7755 true Chr04: 67656968-67664722 Sorghum bicolor
Sobic.004G347100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67656968-67661967 Sorghum bicolor
Sobic.004G347100 5.0kb downstream 5.0kb downstream 7755 true Chr04: 67661968-67669722 Sorghum bicolor
Sobic.004G347100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 67664723-67669722 Sorghum bicolor
Sobic.004G347100 10.0kb upstream 10.0kb upstream 12755 true Chr04: 67651968-67664722 Sorghum bicolor
Sobic.004G347100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67651968-67661967 Sorghum bicolor
Sobic.004G347100 10.0kb downstream 10.0kb downstream 12755 true Chr04: 67661968-67674722 Sorghum bicolor
Sobic.004G347100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 67664723-67674722 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176901 5267 Panicoideae View MSA
124570835 5269 Grass View MSA
122049119 5273 Angiosperm View MSA
121349855 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.194        
cufflinks 1.668       Low
cufflinks 5.853        
cufflinks 7.696        
cufflinks 10.876        
cufflinks 16.92     High High
cufflinks 7.884        
cufflinks 2.941       Low
cufflinks 11.467        
cufflinks 9.031        
cufflinks 7.113        
cufflinks 9.266        
cufflinks 11.307        
cufflinks 6.869        
cufflinks 9.064        
cufflinks 5.452        
cufflinks 7.767        
cufflinks 7.695        
cufflinks 6.975        
cufflinks 11.319        
cufflinks 10.109        
cufflinks 8.272        
cufflinks 8.167        
cufflinks 8.172        
cufflinks 3.395       Low
cufflinks 1.611       Low
cufflinks 7.313        
cufflinks 12.087     High  
cufflinks 6.611        
cufflinks 7.462        

0 Strain