Gene : Sobic.010G000900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF111 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 14 Genomic Order:  9
Name:  ? Sobic.010G000900 Secondary Identifier:  ? PAC:37909707
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7511 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G000900 0.5kb upstream 0.5kb upstream 3137   true Chr10: 83490-86626 Sorghum bicolor
Sobic.010G000900 0.5kb upstream 0.5kb upstream 500   false Chr10: 83490-83989 Sorghum bicolor
Sobic.010G000900 0.5kb downstream 0.5kb downstream 3137   true Chr10: 83990-87126 Sorghum bicolor
Sobic.010G000900 0.5kb downstream 0.5kb downstream 500   false Chr10: 86627-87126 Sorghum bicolor
Sobic.010G000900 1.0kb upstream 1.0kb upstream 3637   true Chr10: 82990-86626 Sorghum bicolor
Sobic.010G000900 1.0kb upstream 1.0kb upstream 1000   false Chr10: 82990-83989 Sorghum bicolor
Sobic.010G000900 1.0kb downstream 1.0kb downstream 3637   true Chr10: 83990-87626 Sorghum bicolor
Sobic.010G000900 1.0kb downstream 1.0kb downstream 1000   false Chr10: 86627-87626 Sorghum bicolor
Sobic.010G000900 2.0kb upstream 2.0kb upstream 4637   true Chr10: 81990-86626 Sorghum bicolor
Sobic.010G000900 2.0kb upstream 2.0kb upstream 2000   false Chr10: 81990-83989 Sorghum bicolor
Sobic.010G000900 2.0kb downstream 2.0kb downstream 4637   true Chr10: 83990-88626 Sorghum bicolor
Sobic.010G000900 2.0kb downstream 2.0kb downstream 2000   false Chr10: 86627-88626 Sorghum bicolor
Sobic.010G000900 5.0kb upstream 5.0kb upstream 7637   true Chr10: 78990-86626 Sorghum bicolor
Sobic.010G000900 5.0kb upstream 5.0kb upstream 5000   false Chr10: 78990-83989 Sorghum bicolor
Sobic.010G000900 5.0kb downstream 5.0kb downstream 7637   true Chr10: 83990-91626 Sorghum bicolor
Sobic.010G000900 5.0kb downstream 5.0kb downstream 5000   false Chr10: 86627-91626 Sorghum bicolor
Sobic.010G000900 10.0kb upstream 10.0kb upstream 12637   true Chr10: 73990-86626 Sorghum bicolor
Sobic.010G000900 10.0kb upstream 10.0kb upstream 10000   false Chr10: 73990-83989 Sorghum bicolor
Sobic.010G000900 10.0kb downstream 10.0kb downstream 12637   true Chr10: 83990-96626 Sorghum bicolor
Sobic.010G000900 10.0kb downstream 10.0kb downstream 10000   false Chr10: 86627-96626 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196571 5267 Panicoideae View MSA
124574030 5269 Grass View MSA
122042286 5273 Angiosperm View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.619        
cufflinks 3.973       Low
cufflinks 7.583        
cufflinks 8.783        
cufflinks 5.386       Low
cufflinks 6.025        
cufflinks 7.496        
cufflinks 4.832       Low
cufflinks 14.195     High High
cufflinks 12.601     High High
cufflinks 12.942     High High
cufflinks 16.884     High High
cufflinks 9.121        
cufflinks 14.456     High High
cufflinks 8.247        
cufflinks 9.535        
cufflinks 7.968        
cufflinks 7.357        
cufflinks 10.254        
cufflinks 11.225        
cufflinks 4.928       Low
cufflinks 11.916     High  
cufflinks 14.058     High High
cufflinks 13.835     High High
cufflinks 8.71     High  
cufflinks 3.81       Low
cufflinks 12.389     High  
cufflinks 4.886       Low
cufflinks 6.17        
cufflinks 7.511        

0 Strain