Gene : Sobic.010G002400 S. bicolor v3.1.1
Defline:  (1 of 3) 2.3.2.5 - Glutaminyl-peptide cyclotransferase / Glutaminyl-tRNA cyclotransferase Genomic Order:  24
Name:  ? Sobic.010G002400 Secondary Identifier:  ? PAC:37910112
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G002400 0.5kb upstream 0.5kb upstream 3829   true Chr10: 218642-222470 Sorghum bicolor
Sobic.010G002400 0.5kb upstream 0.5kb upstream 500   false Chr10: 221971-222470 Sorghum bicolor
Sobic.010G002400 0.5kb downstream 0.5kb downstream 3829   true Chr10: 218142-221970 Sorghum bicolor
Sobic.010G002400 0.5kb downstream 0.5kb downstream 500   false Chr10: 218142-218641 Sorghum bicolor
Sobic.010G002400 1.0kb upstream 1.0kb upstream 4329   true Chr10: 218642-222970 Sorghum bicolor
Sobic.010G002400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 221971-222970 Sorghum bicolor
Sobic.010G002400 1.0kb downstream 1.0kb downstream 4329   true Chr10: 217642-221970 Sorghum bicolor
Sobic.010G002400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 217642-218641 Sorghum bicolor
Sobic.010G002400 2.0kb upstream 2.0kb upstream 5329   true Chr10: 218642-223970 Sorghum bicolor
Sobic.010G002400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 221971-223970 Sorghum bicolor
Sobic.010G002400 2.0kb downstream 2.0kb downstream 5329   true Chr10: 216642-221970 Sorghum bicolor
Sobic.010G002400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 216642-218641 Sorghum bicolor
Sobic.010G002400 5.0kb upstream 5.0kb upstream 8329   true Chr10: 218642-226970 Sorghum bicolor
Sobic.010G002400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 221971-226970 Sorghum bicolor
Sobic.010G002400 5.0kb downstream 5.0kb downstream 8329   true Chr10: 213642-221970 Sorghum bicolor
Sobic.010G002400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 213642-218641 Sorghum bicolor
Sobic.010G002400 10.0kb upstream 10.0kb upstream 13329   true Chr10: 218642-231970 Sorghum bicolor
Sobic.010G002400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 221971-231970 Sorghum bicolor
Sobic.010G002400 10.0kb downstream 10.0kb downstream 13329   true Chr10: 208642-221970 Sorghum bicolor
Sobic.010G002400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 208642-218641 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185105 5267 Panicoideae View MSA
124575182 5269 Grass View MSA
122047891 5273 Angiosperm View MSA
121348416 5274 Embryophyte View MSA
123426276 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.125        
cufflinks 2.389       Low
cufflinks 4.39        
cufflinks 6.268        
cufflinks 5.162        
cufflinks 7.317        
cufflinks 4.984        
cufflinks 3.346       Low
cufflinks 7.615        
cufflinks 7.188        
cufflinks 9.389        
cufflinks 12.863     High High
cufflinks 7.153        
cufflinks 12.267     High High
cufflinks 6.874        
cufflinks 5.178        
cufflinks 5.339        
cufflinks 6.271        
cufflinks 4.524        
cufflinks 7.17        
cufflinks 6.535        
cufflinks 10.458       High
cufflinks 12.812     High High
cufflinks 11.808     High High
cufflinks 4.278        
cufflinks 1.969       Low
cufflinks 8.151        
cufflinks 1.199       Low
cufflinks 5.458        
cufflinks 7.105        

0 Strain