Gene : Sobic.010G004100 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR13402//PTHR13402:SF12 - RGPR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  41
Name:  ? Sobic.010G004100 Secondary Identifier:  ? PAC:37908540
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G004100 0.5kb upstream 0.5kb upstream 8795   true Chr10: 362534-371328 Sorghum bicolor
Sobic.010G004100 0.5kb upstream 0.5kb upstream 500   false Chr10: 370829-371328 Sorghum bicolor
Sobic.010G004100 0.5kb downstream 0.5kb downstream 8795   true Chr10: 362034-370828 Sorghum bicolor
Sobic.010G004100 0.5kb downstream 0.5kb downstream 500   false Chr10: 362034-362533 Sorghum bicolor
Sobic.010G004100 1.0kb upstream 1.0kb upstream 9295   true Chr10: 362534-371828 Sorghum bicolor
Sobic.010G004100 1.0kb upstream 1.0kb upstream 1000   false Chr10: 370829-371828 Sorghum bicolor
Sobic.010G004100 1.0kb downstream 1.0kb downstream 9295   true Chr10: 361534-370828 Sorghum bicolor
Sobic.010G004100 1.0kb downstream 1.0kb downstream 1000   false Chr10: 361534-362533 Sorghum bicolor
Sobic.010G004100 2.0kb upstream 2.0kb upstream 10295   true Chr10: 362534-372828 Sorghum bicolor
Sobic.010G004100 2.0kb upstream 2.0kb upstream 2000   false Chr10: 370829-372828 Sorghum bicolor
Sobic.010G004100 2.0kb downstream 2.0kb downstream 10295   true Chr10: 360534-370828 Sorghum bicolor
Sobic.010G004100 2.0kb downstream 2.0kb downstream 2000   false Chr10: 360534-362533 Sorghum bicolor
Sobic.010G004100 5.0kb upstream 5.0kb upstream 13295   true Chr10: 362534-375828 Sorghum bicolor
Sobic.010G004100 5.0kb upstream 5.0kb upstream 5000   false Chr10: 370829-375828 Sorghum bicolor
Sobic.010G004100 5.0kb downstream 5.0kb downstream 13295   true Chr10: 357534-370828 Sorghum bicolor
Sobic.010G004100 5.0kb downstream 5.0kb downstream 5000   false Chr10: 357534-362533 Sorghum bicolor
Sobic.010G004100 10.0kb upstream 10.0kb upstream 18295   true Chr10: 362534-380828 Sorghum bicolor
Sobic.010G004100 10.0kb upstream 10.0kb upstream 10000   false Chr10: 370829-380828 Sorghum bicolor
Sobic.010G004100 10.0kb downstream 10.0kb downstream 18295   true Chr10: 352534-370828 Sorghum bicolor
Sobic.010G004100 10.0kb downstream 10.0kb downstream 10000   false Chr10: 352534-362533 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193663 5267 Panicoideae View MSA
124581045 5269 Grass View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.202       Low
cufflinks 2.829       Low
cufflinks 4.328       Low
cufflinks 4.066       Low
cufflinks 10.69        
cufflinks 4.624        
cufflinks 5.88        
cufflinks 5.298        
cufflinks 9.862        
cufflinks 8.512        
cufflinks 13.303     High High
cufflinks 16.1     High High
cufflinks 7.793        
cufflinks 12.798     High High
cufflinks 8.615        
cufflinks 3.676       Low
cufflinks 5.057        
cufflinks 5.056        
cufflinks 7.257        
cufflinks 6.016        
cufflinks 12.563       High
cufflinks 10.299        
cufflinks 13.217     High High
cufflinks 13.391     High High
cufflinks 7.215        
cufflinks 3.974       Low
cufflinks 13.221     High High
cufflinks 2.628       Low
cufflinks 5.375        
cufflinks 9.703        

0 Strain