Gene : Sobic.004G340400 S. bicolor v3.1.1
Defline:  (1 of 1) K03240 - translation initiation factor eIF-2B subunit epsilon (EIF2B5) Genomic Order:  3573
Name:  ? Sobic.004G340400 Secondary Identifier:  ? PAC:37929130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G340400 0.5kb upstream 0.5kb upstream 8417 true Chr04: 67215699-67224115 Sorghum bicolor
Sobic.004G340400 0.5kb upstream 0.5kb upstream 500 false Chr04: 67215699-67216198 Sorghum bicolor
Sobic.004G340400 0.5kb downstream 0.5kb downstream 8417 true Chr04: 67216199-67224615 Sorghum bicolor
Sobic.004G340400 0.5kb downstream 0.5kb downstream 500 false Chr04: 67224116-67224615 Sorghum bicolor
Sobic.004G340400 1.0kb upstream 1.0kb upstream 8917 true Chr04: 67215199-67224115 Sorghum bicolor
Sobic.004G340400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67215199-67216198 Sorghum bicolor
Sobic.004G340400 1.0kb downstream 1.0kb downstream 8917 true Chr04: 67216199-67225115 Sorghum bicolor
Sobic.004G340400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 67224116-67225115 Sorghum bicolor
Sobic.004G340400 2.0kb upstream 2.0kb upstream 9917 true Chr04: 67214199-67224115 Sorghum bicolor
Sobic.004G340400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67214199-67216198 Sorghum bicolor
Sobic.004G340400 2.0kb downstream 2.0kb downstream 9917 true Chr04: 67216199-67226115 Sorghum bicolor
Sobic.004G340400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 67224116-67226115 Sorghum bicolor
Sobic.004G340400 5.0kb upstream 5.0kb upstream 12917 true Chr04: 67211199-67224115 Sorghum bicolor
Sobic.004G340400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67211199-67216198 Sorghum bicolor
Sobic.004G340400 5.0kb downstream 5.0kb downstream 12917 true Chr04: 67216199-67229115 Sorghum bicolor
Sobic.004G340400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 67224116-67229115 Sorghum bicolor
Sobic.004G340400 10.0kb upstream 10.0kb upstream 17917 true Chr04: 67206199-67224115 Sorghum bicolor
Sobic.004G340400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67206199-67216198 Sorghum bicolor
Sobic.004G340400 10.0kb downstream 10.0kb downstream 17917 true Chr04: 67216199-67234115 Sorghum bicolor
Sobic.004G340400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 67224116-67234115 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190690 5267 Panicoideae View MSA
124570610 5269 Grass View MSA
122041761 5273 Angiosperm View MSA
121347113 5274 Embryophyte View MSA
123426650 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.892        
cufflinks 1.122       Low
cufflinks 4.92        
cufflinks 8.315        
cufflinks 11.495        
cufflinks 7.076        
cufflinks 5.303        
cufflinks 1.872       Low
cufflinks 9.586        
cufflinks 10.013        
cufflinks 8.471        
cufflinks 7.519        
cufflinks 7.225        
cufflinks 8.521        
cufflinks 7.898        
cufflinks 2.711       Low
cufflinks 5.471        
cufflinks 6.261        
cufflinks 3.21       Low
cufflinks 5.858        
cufflinks 14.036       High
cufflinks 11.057        
cufflinks 10.006        
cufflinks 9.829        
cufflinks 2.391       Low
cufflinks 1.089       Low
cufflinks 10.382        
cufflinks 5.964        
cufflinks 5.662        
cufflinks 12.235     High  

0 Strain