Gene : Sobic.004G341700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22847//PTHR22847:SF473 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3586
Name:  ? Sobic.004G341700 Secondary Identifier:  ? PAC:37932032
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G341700 0.5kb upstream 0.5kb upstream 10326 true Chr04: 67289061-67299386 Sorghum bicolor
Sobic.004G341700 0.5kb upstream 0.5kb upstream 500 false Chr04: 67298887-67299386 Sorghum bicolor
Sobic.004G341700 0.5kb downstream 0.5kb downstream 10326 true Chr04: 67288561-67298886 Sorghum bicolor
Sobic.004G341700 0.5kb downstream 0.5kb downstream 500 false Chr04: 67288561-67289060 Sorghum bicolor
Sobic.004G341700 1.0kb upstream 1.0kb upstream 10826 true Chr04: 67289061-67299886 Sorghum bicolor
Sobic.004G341700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67298887-67299886 Sorghum bicolor
Sobic.004G341700 1.0kb downstream 1.0kb downstream 10826 true Chr04: 67288061-67298886 Sorghum bicolor
Sobic.004G341700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 67288061-67289060 Sorghum bicolor
Sobic.004G341700 2.0kb upstream 2.0kb upstream 11826 true Chr04: 67289061-67300886 Sorghum bicolor
Sobic.004G341700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67298887-67300886 Sorghum bicolor
Sobic.004G341700 2.0kb downstream 2.0kb downstream 11826 true Chr04: 67287061-67298886 Sorghum bicolor
Sobic.004G341700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 67287061-67289060 Sorghum bicolor
Sobic.004G341700 5.0kb upstream 5.0kb upstream 14826 true Chr04: 67289061-67303886 Sorghum bicolor
Sobic.004G341700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67298887-67303886 Sorghum bicolor
Sobic.004G341700 5.0kb downstream 5.0kb downstream 14826 true Chr04: 67284061-67298886 Sorghum bicolor
Sobic.004G341700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 67284061-67289060 Sorghum bicolor
Sobic.004G341700 10.0kb upstream 10.0kb upstream 19826 true Chr04: 67289061-67308886 Sorghum bicolor
Sobic.004G341700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67298887-67308886 Sorghum bicolor
Sobic.004G341700 10.0kb downstream 10.0kb downstream 19826 true Chr04: 67279061-67298886 Sorghum bicolor
Sobic.004G341700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 67279061-67289060 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191288 5267 Panicoideae View MSA
124580503 5269 Grass View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.636       Low
cufflinks 1.265       Low
cufflinks 1.661       Low
cufflinks 1.589       Low
cufflinks 9.151       High
cufflinks 2.773        
cufflinks 4.619        
cufflinks 2.549        
cufflinks 2.347        
cufflinks 2.922        
cufflinks 2.701        
cufflinks 4.391        
cufflinks 4.313        
cufflinks 3.231        
cufflinks 3.752        
cufflinks 1.337       Low
cufflinks 4.478        
cufflinks 4.586        
cufflinks 3.08        
cufflinks 4.502        
cufflinks 10.1       High
cufflinks 3.327        
cufflinks 3.759        
cufflinks 3.61        
cufflinks 2.324        
cufflinks 1.949       Low
cufflinks 3.319        
cufflinks 0.877       Low
cufflinks 3.447        
cufflinks 4.119        

0 Strain