Gene : Sobic.004G339000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22957//PTHR22957:SF206 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3559
Name:  ? Sobic.004G339000 Secondary Identifier:  ? PAC:37932437
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G339000 0.5kb upstream 0.5kb upstream 5243 true Chr04: 67099560-67104802 Sorghum bicolor
Sobic.004G339000 0.5kb upstream 0.5kb upstream 500 false Chr04: 67104303-67104802 Sorghum bicolor
Sobic.004G339000 0.5kb downstream 0.5kb downstream 5243 true Chr04: 67099060-67104302 Sorghum bicolor
Sobic.004G339000 0.5kb downstream 0.5kb downstream 500 false Chr04: 67099060-67099559 Sorghum bicolor
Sobic.004G339000 1.0kb upstream 1.0kb upstream 5743 true Chr04: 67099560-67105302 Sorghum bicolor
Sobic.004G339000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 67104303-67105302 Sorghum bicolor
Sobic.004G339000 1.0kb downstream 1.0kb downstream 5743 true Chr04: 67098560-67104302 Sorghum bicolor
Sobic.004G339000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 67098560-67099559 Sorghum bicolor
Sobic.004G339000 2.0kb upstream 2.0kb upstream 6743 true Chr04: 67099560-67106302 Sorghum bicolor
Sobic.004G339000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 67104303-67106302 Sorghum bicolor
Sobic.004G339000 2.0kb downstream 2.0kb downstream 6743 true Chr04: 67097560-67104302 Sorghum bicolor
Sobic.004G339000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 67097560-67099559 Sorghum bicolor
Sobic.004G339000 5.0kb upstream 5.0kb upstream 9743 true Chr04: 67099560-67109302 Sorghum bicolor
Sobic.004G339000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 67104303-67109302 Sorghum bicolor
Sobic.004G339000 5.0kb downstream 5.0kb downstream 9743 true Chr04: 67094560-67104302 Sorghum bicolor
Sobic.004G339000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 67094560-67099559 Sorghum bicolor
Sobic.004G339000 10.0kb upstream 10.0kb upstream 14743 true Chr04: 67099560-67114302 Sorghum bicolor
Sobic.004G339000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 67104303-67114302 Sorghum bicolor
Sobic.004G339000 10.0kb downstream 10.0kb downstream 14743 true Chr04: 67089560-67104302 Sorghum bicolor
Sobic.004G339000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 67089560-67099559 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181442 5267 Panicoideae View MSA
124572290 5269 Grass View MSA
122051014 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.486       Low
cufflinks 0.296       Low
cufflinks 1.104        
cufflinks 1.862        
cufflinks 3.466        
cufflinks 1.733        
cufflinks 1.707        
cufflinks 0.402       Low
cufflinks 4.477       High
cufflinks 5.011       High
cufflinks 3.285        
cufflinks 4.043        
cufflinks 2.804        
cufflinks 3.833        
cufflinks 2.912        
cufflinks 0.639       Low
cufflinks 1.65        
cufflinks 1.755        
cufflinks 0.68       Low
cufflinks 2.384        
cufflinks 4.032        
cufflinks 3.379        
cufflinks 3.693        
cufflinks 3.554        
cufflinks 0.767       Low
cufflinks 0.318       Low
cufflinks 4.075        
cufflinks 0.547       Low
cufflinks 0.864        
cufflinks 2.869        

0 Strain