Gene : Sobic.010G009200 S. bicolor v3.1.1
Defline:  (1 of 1) 1.2.1.31 - L-aminoadipate-semialdehyde dehydrogenase / oxidoreductase Genomic Order:  91
Name:  ? Sobic.010G009200 Secondary Identifier:  ? PAC:37911881
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor LYSINE-DEG1-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G009200 0.5kb upstream 0.5kb upstream 8351   true Chr10: 753467-761817 Sorghum bicolor
Sobic.010G009200 0.5kb upstream 0.5kb upstream 500   false Chr10: 761318-761817 Sorghum bicolor
Sobic.010G009200 0.5kb downstream 0.5kb downstream 8351   true Chr10: 752967-761317 Sorghum bicolor
Sobic.010G009200 0.5kb downstream 0.5kb downstream 500   false Chr10: 752967-753466 Sorghum bicolor
Sobic.010G009200 1.0kb upstream 1.0kb upstream 8851   true Chr10: 753467-762317 Sorghum bicolor
Sobic.010G009200 1.0kb upstream 1.0kb upstream 1000   false Chr10: 761318-762317 Sorghum bicolor
Sobic.010G009200 1.0kb downstream 1.0kb downstream 8851   true Chr10: 752467-761317 Sorghum bicolor
Sobic.010G009200 1.0kb downstream 1.0kb downstream 1000   false Chr10: 752467-753466 Sorghum bicolor
Sobic.010G009200 2.0kb upstream 2.0kb upstream 9851   true Chr10: 753467-763317 Sorghum bicolor
Sobic.010G009200 2.0kb upstream 2.0kb upstream 2000   false Chr10: 761318-763317 Sorghum bicolor
Sobic.010G009200 2.0kb downstream 2.0kb downstream 9851   true Chr10: 751467-761317 Sorghum bicolor
Sobic.010G009200 2.0kb downstream 2.0kb downstream 2000   false Chr10: 751467-753466 Sorghum bicolor
Sobic.010G009200 5.0kb upstream 5.0kb upstream 12851   true Chr10: 753467-766317 Sorghum bicolor
Sobic.010G009200 5.0kb upstream 5.0kb upstream 5000   false Chr10: 761318-766317 Sorghum bicolor
Sobic.010G009200 5.0kb downstream 5.0kb downstream 12851   true Chr10: 748467-761317 Sorghum bicolor
Sobic.010G009200 5.0kb downstream 5.0kb downstream 5000   false Chr10: 748467-753466 Sorghum bicolor
Sobic.010G009200 10.0kb upstream 10.0kb upstream 17851   true Chr10: 753467-771317 Sorghum bicolor
Sobic.010G009200 10.0kb upstream 10.0kb upstream 10000   false Chr10: 761318-771317 Sorghum bicolor
Sobic.010G009200 10.0kb downstream 10.0kb downstream 17851   true Chr10: 743467-761317 Sorghum bicolor
Sobic.010G009200 10.0kb downstream 10.0kb downstream 10000   false Chr10: 743467-753466 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187812 5267 Panicoideae View MSA
124568837 5269 Grass View MSA
122047218 5273 Angiosperm View MSA
121345046 5274 Embryophyte View MSA
123425856 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.1       Low
cufflinks 0.094       Low
cufflinks 0.204        
cufflinks 0.225        
cufflinks 0.307        
cufflinks 0.393       High
cufflinks 0.238        
cufflinks 0.079       Low
cufflinks 0.588       High
cufflinks 0.53       High
cufflinks 0.198        
cufflinks 0.347        
cufflinks 0.386       High
cufflinks 0.189        
cufflinks 0.278        
cufflinks 0.115       Low
cufflinks 0.228        
cufflinks 0.259        
cufflinks 0.137       Low
cufflinks 0.278        
cufflinks 0.541       High
cufflinks 0.203        
cufflinks 0.211        
cufflinks 0.198        
cufflinks 0.205        
cufflinks 0.081       Low
cufflinks 0.277        
cufflinks 0.248        
cufflinks 0.188        
cufflinks 0.343        

0 Strain