Gene : Sobic.010G012500 S. bicolor v3.1.1
Defline:  (1 of 3) PF06592 - Protein of unknown function (DUF1138) (DUF1138) Genomic Order:  124
Name:  ? Sobic.010G012500 Secondary Identifier:  ? PAC:37908771
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G012500 0.5kb upstream 0.5kb upstream 2249   true Chr10: 1063560-1065808 Sorghum bicolor
Sobic.010G012500 0.5kb upstream 0.5kb upstream 500   false Chr10: 1063560-1064059 Sorghum bicolor
Sobic.010G012500 0.5kb downstream 0.5kb downstream 2249   true Chr10: 1064060-1066308 Sorghum bicolor
Sobic.010G012500 0.5kb downstream 0.5kb downstream 500   false Chr10: 1065809-1066308 Sorghum bicolor
Sobic.010G012500 1.0kb upstream 1.0kb upstream 2749   true Chr10: 1063060-1065808 Sorghum bicolor
Sobic.010G012500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 1063060-1064059 Sorghum bicolor
Sobic.010G012500 1.0kb downstream 1.0kb downstream 2749   true Chr10: 1064060-1066808 Sorghum bicolor
Sobic.010G012500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 1065809-1066808 Sorghum bicolor
Sobic.010G012500 2.0kb upstream 2.0kb upstream 3749   true Chr10: 1062060-1065808 Sorghum bicolor
Sobic.010G012500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 1062060-1064059 Sorghum bicolor
Sobic.010G012500 2.0kb downstream 2.0kb downstream 3749   true Chr10: 1064060-1067808 Sorghum bicolor
Sobic.010G012500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 1065809-1067808 Sorghum bicolor
Sobic.010G012500 5.0kb upstream 5.0kb upstream 6749   true Chr10: 1059060-1065808 Sorghum bicolor
Sobic.010G012500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 1059060-1064059 Sorghum bicolor
Sobic.010G012500 5.0kb downstream 5.0kb downstream 6749   true Chr10: 1064060-1070808 Sorghum bicolor
Sobic.010G012500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 1065809-1070808 Sorghum bicolor
Sobic.010G012500 10.0kb upstream 10.0kb upstream 11749   true Chr10: 1054060-1065808 Sorghum bicolor
Sobic.010G012500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 1054060-1064059 Sorghum bicolor
Sobic.010G012500 10.0kb downstream 10.0kb downstream 11749   true Chr10: 1064060-1075808 Sorghum bicolor
Sobic.010G012500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 1065809-1075808 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190153 5267 Panicoideae View MSA
124590665 5269 Grass View MSA
122051261 5273 Angiosperm View MSA
121351565 5274 Embryophyte View MSA
123382229 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 103.125     High High
cufflinks 26.935     High  
cufflinks 28.178     High  
cufflinks 43.913     High  
cufflinks 30.408     High  
cufflinks 34.996     High  
cufflinks 40.92     High  
cufflinks 29.893     High  
cufflinks 24.661     High Low
cufflinks 35.838     High  
cufflinks 47.133     High  
cufflinks 49.342     High  
cufflinks 25.972     High Low
cufflinks 62.59     High High
cufflinks 36.274     High  
cufflinks 24.651     High Low
cufflinks 43.66     High  
cufflinks 44.054     High  
cufflinks 19.302     High Low
cufflinks 44.059     High  
cufflinks 17.902     High Low
cufflinks 77.221     High High
cufflinks 57.219     High  
cufflinks 56.935     High  
cufflinks 23.746     High Low
cufflinks 23.075     High Low
cufflinks 43.701     High  
cufflinks 24.437     High Low
cufflinks 51.177     High  
cufflinks 31.62     High  

0 Strain