Gene : Sobic.010G014100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24078//PTHR24078:SF283 - DNAJ HOMOLOG SUBFAMILY C MEMBER // GAMETOPHYTIC FACTOR 2 Genomic Order:  139
Name:  ? Sobic.010G014100 Secondary Identifier:  ? PAC:37911088
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G014100 0.5kb upstream 0.5kb upstream 7244   true Chr10: 1163883-1171126 Sorghum bicolor
Sobic.010G014100 0.5kb upstream 0.5kb upstream 500   false Chr10: 1170627-1171126 Sorghum bicolor
Sobic.010G014100 0.5kb downstream 0.5kb downstream 7244   true Chr10: 1163383-1170626 Sorghum bicolor
Sobic.010G014100 0.5kb downstream 0.5kb downstream 500   false Chr10: 1163383-1163882 Sorghum bicolor
Sobic.010G014100 1.0kb upstream 1.0kb upstream 7744   true Chr10: 1163883-1171626 Sorghum bicolor
Sobic.010G014100 1.0kb upstream 1.0kb upstream 1000   false Chr10: 1170627-1171626 Sorghum bicolor
Sobic.010G014100 1.0kb downstream 1.0kb downstream 7744   true Chr10: 1162883-1170626 Sorghum bicolor
Sobic.010G014100 1.0kb downstream 1.0kb downstream 1000   false Chr10: 1162883-1163882 Sorghum bicolor
Sobic.010G014100 2.0kb upstream 2.0kb upstream 8744   true Chr10: 1163883-1172626 Sorghum bicolor
Sobic.010G014100 2.0kb upstream 2.0kb upstream 2000   false Chr10: 1170627-1172626 Sorghum bicolor
Sobic.010G014100 2.0kb downstream 2.0kb downstream 8744   true Chr10: 1161883-1170626 Sorghum bicolor
Sobic.010G014100 2.0kb downstream 2.0kb downstream 2000   false Chr10: 1161883-1163882 Sorghum bicolor
Sobic.010G014100 5.0kb upstream 5.0kb upstream 11744   true Chr10: 1163883-1175626 Sorghum bicolor
Sobic.010G014100 5.0kb upstream 5.0kb upstream 5000   false Chr10: 1170627-1175626 Sorghum bicolor
Sobic.010G014100 5.0kb downstream 5.0kb downstream 11744   true Chr10: 1158883-1170626 Sorghum bicolor
Sobic.010G014100 5.0kb downstream 5.0kb downstream 5000   false Chr10: 1158883-1163882 Sorghum bicolor
Sobic.010G014100 10.0kb upstream 10.0kb upstream 16744   true Chr10: 1163883-1180626 Sorghum bicolor
Sobic.010G014100 10.0kb upstream 10.0kb upstream 10000   false Chr10: 1170627-1180626 Sorghum bicolor
Sobic.010G014100 10.0kb downstream 10.0kb downstream 16744   true Chr10: 1153883-1170626 Sorghum bicolor
Sobic.010G014100 10.0kb downstream 10.0kb downstream 10000   false Chr10: 1153883-1163882 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179738 5267 Panicoideae View MSA
124569666 5269 Grass View MSA
122041939 5273 Angiosperm View MSA
121345452 5274 Embryophyte View MSA
123380218 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.368        
cufflinks 2.831        
cufflinks 3.105        
cufflinks 6.854       High
cufflinks 5.153        
cufflinks 4.121        
cufflinks 2.998        
cufflinks 3.236        
cufflinks 8.995       High
cufflinks 8.523       High
cufflinks 3.288        
cufflinks 3.301        
cufflinks 3.579        
cufflinks 3.362        
cufflinks 4.182        
cufflinks 3.561        
cufflinks 3.803        
cufflinks 3.183        
cufflinks 3.109        
cufflinks 5.761        
cufflinks 6.073        
cufflinks 3.772        
cufflinks 3.643        
cufflinks 3.396        
cufflinks 5.887        
cufflinks 4.564        
cufflinks 4.693        
cufflinks 21.52     High High
cufflinks 2.904        
cufflinks 4.765        

0 Strain