Gene : Sobic.010G013800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12136//PTHR12136:SF63 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // SUBFAMILY NOT NAMED Genomic Order:  137
Name:  ? Sobic.010G013800 Secondary Identifier:  ? PAC:37909114
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G013800 0.5kb upstream 0.5kb upstream 8385   true Chr10: 1148490-1156874 Sorghum bicolor
Sobic.010G013800 0.5kb upstream 0.5kb upstream 500   false Chr10: 1148490-1148989 Sorghum bicolor
Sobic.010G013800 0.5kb downstream 0.5kb downstream 8385   true Chr10: 1148990-1157374 Sorghum bicolor
Sobic.010G013800 0.5kb downstream 0.5kb downstream 500   false Chr10: 1156875-1157374 Sorghum bicolor
Sobic.010G013800 1.0kb upstream 1.0kb upstream 8885   true Chr10: 1147990-1156874 Sorghum bicolor
Sobic.010G013800 1.0kb upstream 1.0kb upstream 1000   false Chr10: 1147990-1148989 Sorghum bicolor
Sobic.010G013800 1.0kb downstream 1.0kb downstream 8885   true Chr10: 1148990-1157874 Sorghum bicolor
Sobic.010G013800 1.0kb downstream 1.0kb downstream 1000   false Chr10: 1156875-1157874 Sorghum bicolor
Sobic.010G013800 2.0kb upstream 2.0kb upstream 9885   true Chr10: 1146990-1156874 Sorghum bicolor
Sobic.010G013800 2.0kb upstream 2.0kb upstream 2000   false Chr10: 1146990-1148989 Sorghum bicolor
Sobic.010G013800 2.0kb downstream 2.0kb downstream 9885   true Chr10: 1148990-1158874 Sorghum bicolor
Sobic.010G013800 2.0kb downstream 2.0kb downstream 2000   false Chr10: 1156875-1158874 Sorghum bicolor
Sobic.010G013800 5.0kb upstream 5.0kb upstream 12885   true Chr10: 1143990-1156874 Sorghum bicolor
Sobic.010G013800 5.0kb upstream 5.0kb upstream 5000   false Chr10: 1143990-1148989 Sorghum bicolor
Sobic.010G013800 5.0kb downstream 5.0kb downstream 12885   true Chr10: 1148990-1161874 Sorghum bicolor
Sobic.010G013800 5.0kb downstream 5.0kb downstream 5000   false Chr10: 1156875-1161874 Sorghum bicolor
Sobic.010G013800 10.0kb upstream 10.0kb upstream 17885   true Chr10: 1138990-1156874 Sorghum bicolor
Sobic.010G013800 10.0kb upstream 10.0kb upstream 10000   false Chr10: 1138990-1148989 Sorghum bicolor
Sobic.010G013800 10.0kb downstream 10.0kb downstream 17885   true Chr10: 1148990-1166874 Sorghum bicolor
Sobic.010G013800 10.0kb downstream 10.0kb downstream 10000   false Chr10: 1156875-1166874 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179430 5267 Panicoideae View MSA
124582068 5269 Grass View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.439       Low
cufflinks 14.597     High  
cufflinks 10.646     High  
cufflinks 5.849        
cufflinks 2.716        
cufflinks 12.348        
cufflinks 9.008        
cufflinks 8.289        
cufflinks 8.452        
cufflinks 5.078        
cufflinks 17.2     High  
cufflinks 13.591     High  
cufflinks 6.584        
cufflinks 14.461     High  
cufflinks 4.149        
cufflinks 11.817     High  
cufflinks 8.291        
cufflinks 9.681        
cufflinks 18.186     High High
cufflinks 6.304        
cufflinks 1.809       Low
cufflinks 8.549        
cufflinks 13.62     High  
cufflinks 13.701     High  
cufflinks 15.893     High  
cufflinks 12.601     High  
cufflinks 12.486     High  
cufflinks 0.055     Low Low
cufflinks 5.541        
cufflinks 3.932        

0 Strain