Gene : Sobic.004G332400 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR13109 - NEUROCHONDRIN Genomic Order:  3488
Name:  ? Sobic.004G332400 Secondary Identifier:  ? PAC:37933141
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G332400 0.5kb upstream 0.5kb upstream 7559 true Chr04: 66520801-66528359 Sorghum bicolor
Sobic.004G332400 0.5kb upstream 0.5kb upstream 500 false Chr04: 66520801-66521300 Sorghum bicolor
Sobic.004G332400 0.5kb downstream 0.5kb downstream 7559 true Chr04: 66521301-66528859 Sorghum bicolor
Sobic.004G332400 0.5kb downstream 0.5kb downstream 500 false Chr04: 66528360-66528859 Sorghum bicolor
Sobic.004G332400 1.0kb upstream 1.0kb upstream 8059 true Chr04: 66520301-66528359 Sorghum bicolor
Sobic.004G332400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 66520301-66521300 Sorghum bicolor
Sobic.004G332400 1.0kb downstream 1.0kb downstream 8059 true Chr04: 66521301-66529359 Sorghum bicolor
Sobic.004G332400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 66528360-66529359 Sorghum bicolor
Sobic.004G332400 2.0kb upstream 2.0kb upstream 9059 true Chr04: 66519301-66528359 Sorghum bicolor
Sobic.004G332400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 66519301-66521300 Sorghum bicolor
Sobic.004G332400 2.0kb downstream 2.0kb downstream 9059 true Chr04: 66521301-66530359 Sorghum bicolor
Sobic.004G332400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 66528360-66530359 Sorghum bicolor
Sobic.004G332400 5.0kb upstream 5.0kb upstream 12059 true Chr04: 66516301-66528359 Sorghum bicolor
Sobic.004G332400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 66516301-66521300 Sorghum bicolor
Sobic.004G332400 5.0kb downstream 5.0kb downstream 12059 true Chr04: 66521301-66533359 Sorghum bicolor
Sobic.004G332400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 66528360-66533359 Sorghum bicolor
Sobic.004G332400 10.0kb upstream 10.0kb upstream 17059 true Chr04: 66511301-66528359 Sorghum bicolor
Sobic.004G332400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 66511301-66521300 Sorghum bicolor
Sobic.004G332400 10.0kb downstream 10.0kb downstream 17059 true Chr04: 66521301-66538359 Sorghum bicolor
Sobic.004G332400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 66528360-66538359 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189030 5267 Panicoideae View MSA
124584444 5269 Grass View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.794       High
cufflinks 0.261       Low
cufflinks 0.462       Low
cufflinks 0.947        
cufflinks 1.208        
cufflinks 1.984       High
cufflinks 0.642        
cufflinks 0.558       Low
cufflinks 1.804       High
cufflinks 1.69       High
cufflinks 0.718        
cufflinks 1.038        
cufflinks 1.233        
cufflinks 0.964        
cufflinks 0.906        
cufflinks 0.51       Low
cufflinks 0.58       Low
cufflinks 0.601        
cufflinks 0.404       Low
cufflinks 0.748        
cufflinks 1.711       High
cufflinks 1.235        
cufflinks 1.033        
cufflinks 0.967        
cufflinks 0.699        
cufflinks 0.43       Low
cufflinks 1.036        
cufflinks 2.757       High
cufflinks 0.747        
cufflinks 1.256        

0 Strain