Gene : Sobic.004G331600 S. bicolor v3.1.1
Defline:  (1 of 1) K02209 - DNA replication licensing factor MCM5 (MCM5, CDC46) Genomic Order:  3480
Name:  ? Sobic.004G331600 Secondary Identifier:  ? PAC:37930891
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G331600 0.5kb upstream 0.5kb upstream 5127 true Chr04: 66473376-66478502 Sorghum bicolor
Sobic.004G331600 0.5kb upstream 0.5kb upstream 500 false Chr04: 66478003-66478502 Sorghum bicolor
Sobic.004G331600 0.5kb downstream 0.5kb downstream 5127 true Chr04: 66472876-66478002 Sorghum bicolor
Sobic.004G331600 0.5kb downstream 0.5kb downstream 500 false Chr04: 66472876-66473375 Sorghum bicolor
Sobic.004G331600 1.0kb upstream 1.0kb upstream 5627 true Chr04: 66473376-66479002 Sorghum bicolor
Sobic.004G331600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 66478003-66479002 Sorghum bicolor
Sobic.004G331600 1.0kb downstream 1.0kb downstream 5627 true Chr04: 66472376-66478002 Sorghum bicolor
Sobic.004G331600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 66472376-66473375 Sorghum bicolor
Sobic.004G331600 2.0kb upstream 2.0kb upstream 6627 true Chr04: 66473376-66480002 Sorghum bicolor
Sobic.004G331600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 66478003-66480002 Sorghum bicolor
Sobic.004G331600 2.0kb downstream 2.0kb downstream 6627 true Chr04: 66471376-66478002 Sorghum bicolor
Sobic.004G331600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 66471376-66473375 Sorghum bicolor
Sobic.004G331600 5.0kb upstream 5.0kb upstream 9627 true Chr04: 66473376-66483002 Sorghum bicolor
Sobic.004G331600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 66478003-66483002 Sorghum bicolor
Sobic.004G331600 5.0kb downstream 5.0kb downstream 9627 true Chr04: 66468376-66478002 Sorghum bicolor
Sobic.004G331600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 66468376-66473375 Sorghum bicolor
Sobic.004G331600 10.0kb upstream 10.0kb upstream 14627 true Chr04: 66473376-66488002 Sorghum bicolor
Sobic.004G331600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 66478003-66488002 Sorghum bicolor
Sobic.004G331600 10.0kb downstream 10.0kb downstream 14627 true Chr04: 66463376-66478002 Sorghum bicolor
Sobic.004G331600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 66463376-66473375 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190534 5267 Panicoideae View MSA
124572568 5269 Grass View MSA
122046085 5273 Angiosperm View MSA
123428876 5275 Viridiplantae View MSA
121346646 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.828     High  
cufflinks 0.121       Low
cufflinks 0.305       Low
cufflinks 0.559       Low
cufflinks 10.239        
cufflinks 1.806        
cufflinks 11.511     High  
cufflinks 0.687        
cufflinks 2.737        
cufflinks 5.09        
cufflinks 12.073     High  
cufflinks 10.863        
cufflinks 1.62        
cufflinks 13.985     High  
cufflinks 8.181        
cufflinks 0.286       Low
cufflinks 11.501     High  
cufflinks 12.971     High  
cufflinks 0.471       Low
cufflinks 7.908        
cufflinks 30.563     High High
cufflinks 12.559     High  
cufflinks 13.49     High  
cufflinks 14.279     High  
cufflinks 0.209       Low
cufflinks 0.095       Low
cufflinks 6.976        
cufflinks 0.053     Low Low
cufflinks 1.188        
cufflinks 16.435     High  

0 Strain