Gene : Sobic.004G327100 S. bicolor v3.1.1
Defline:  (1 of 1) K17908 - autophagy-related protein 18 (WIPI, ATG18) Genomic Order:  3435
Name:  ? Sobic.004G327100 Secondary Identifier:  ? PAC:37932544
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G327100 0.5kb upstream 0.5kb upstream 8178 true Chr04: 66183285-66191462 Sorghum bicolor
Sobic.004G327100 0.5kb upstream 0.5kb upstream 500 false Chr04: 66190963-66191462 Sorghum bicolor
Sobic.004G327100 0.5kb downstream 0.5kb downstream 8178 true Chr04: 66182785-66190962 Sorghum bicolor
Sobic.004G327100 0.5kb downstream 0.5kb downstream 500 false Chr04: 66182785-66183284 Sorghum bicolor
Sobic.004G327100 1.0kb upstream 1.0kb upstream 8678 true Chr04: 66183285-66191962 Sorghum bicolor
Sobic.004G327100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 66190963-66191962 Sorghum bicolor
Sobic.004G327100 1.0kb downstream 1.0kb downstream 8678 true Chr04: 66182285-66190962 Sorghum bicolor
Sobic.004G327100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 66182285-66183284 Sorghum bicolor
Sobic.004G327100 2.0kb upstream 2.0kb upstream 9678 true Chr04: 66183285-66192962 Sorghum bicolor
Sobic.004G327100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 66190963-66192962 Sorghum bicolor
Sobic.004G327100 2.0kb downstream 2.0kb downstream 9678 true Chr04: 66181285-66190962 Sorghum bicolor
Sobic.004G327100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 66181285-66183284 Sorghum bicolor
Sobic.004G327100 5.0kb upstream 5.0kb upstream 12678 true Chr04: 66183285-66195962 Sorghum bicolor
Sobic.004G327100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 66190963-66195962 Sorghum bicolor
Sobic.004G327100 5.0kb downstream 5.0kb downstream 12678 true Chr04: 66178285-66190962 Sorghum bicolor
Sobic.004G327100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 66178285-66183284 Sorghum bicolor
Sobic.004G327100 10.0kb upstream 10.0kb upstream 17678 true Chr04: 66183285-66200962 Sorghum bicolor
Sobic.004G327100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 66190963-66200962 Sorghum bicolor
Sobic.004G327100 10.0kb downstream 10.0kb downstream 17678 true Chr04: 66173285-66190962 Sorghum bicolor
Sobic.004G327100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 66173285-66183284 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178086 5267 Panicoideae View MSA
124574203 5269 Grass View MSA
122046109 5273 Angiosperm View MSA
121345292 5274 Embryophyte View MSA
123426742 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.806        
cufflinks 0.387       Low
cufflinks 0.776        
cufflinks 1.342        
cufflinks 0.882        
cufflinks 1.392        
cufflinks 0.85        
cufflinks 0.444       Low
cufflinks 2.212       High
cufflinks 2.462       High
cufflinks 1.062        
cufflinks 1.558       High
cufflinks 1.307        
cufflinks 1.037        
cufflinks 0.869        
cufflinks 1.08        
cufflinks 0.835        
cufflinks 0.734        
cufflinks 0.449       Low
cufflinks 1.64       High
cufflinks 1.022        
cufflinks 0.929        
cufflinks 1.106        
cufflinks 0.983        
cufflinks 0.636        
cufflinks 0.323       Low
cufflinks 1.032        
cufflinks 1.219        
cufflinks 0.448       Low
cufflinks 0.869        

0 Strain