Gene : Sobic.004G325100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22950//PTHR22950:SF269 - AMINO ACID TRANSPORTER // EXPRESSED PROTEIN Genomic Order:  3412
Name:  ? Sobic.004G325100 Secondary Identifier:  ? PAC:37929284
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G325100 0.5kb upstream 0.5kb upstream 6510 true Chr04: 66052332-66058841 Sorghum bicolor
Sobic.004G325100 0.5kb upstream 0.5kb upstream 500 false Chr04: 66058342-66058841 Sorghum bicolor
Sobic.004G325100 0.5kb downstream 0.5kb downstream 6510 true Chr04: 66051832-66058341 Sorghum bicolor
Sobic.004G325100 0.5kb downstream 0.5kb downstream 500 false Chr04: 66051832-66052331 Sorghum bicolor
Sobic.004G325100 1.0kb upstream 1.0kb upstream 7010 true Chr04: 66052332-66059341 Sorghum bicolor
Sobic.004G325100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 66058342-66059341 Sorghum bicolor
Sobic.004G325100 1.0kb downstream 1.0kb downstream 7010 true Chr04: 66051332-66058341 Sorghum bicolor
Sobic.004G325100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 66051332-66052331 Sorghum bicolor
Sobic.004G325100 2.0kb upstream 2.0kb upstream 8010 true Chr04: 66052332-66060341 Sorghum bicolor
Sobic.004G325100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 66058342-66060341 Sorghum bicolor
Sobic.004G325100 2.0kb downstream 2.0kb downstream 8010 true Chr04: 66050332-66058341 Sorghum bicolor
Sobic.004G325100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 66050332-66052331 Sorghum bicolor
Sobic.004G325100 5.0kb upstream 5.0kb upstream 11010 true Chr04: 66052332-66063341 Sorghum bicolor
Sobic.004G325100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 66058342-66063341 Sorghum bicolor
Sobic.004G325100 5.0kb downstream 5.0kb downstream 11010 true Chr04: 66047332-66058341 Sorghum bicolor
Sobic.004G325100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 66047332-66052331 Sorghum bicolor
Sobic.004G325100 10.0kb upstream 10.0kb upstream 16010 true Chr04: 66052332-66068341 Sorghum bicolor
Sobic.004G325100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 66058342-66068341 Sorghum bicolor
Sobic.004G325100 10.0kb downstream 10.0kb downstream 16010 true Chr04: 66042332-66058341 Sorghum bicolor
Sobic.004G325100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 66042332-66052331 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186449 5267 Panicoideae View MSA
124578652 5269 Grass View MSA
122047534 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.247     High High
cufflinks 3.651        
cufflinks 8.467        
cufflinks 10.109        
cufflinks 8.74        
cufflinks 4.172        
cufflinks 4.053        
cufflinks 4.209        
cufflinks 0.557       Low
cufflinks 2.033       Low
cufflinks 7.078        
cufflinks 5.159        
cufflinks 2.353       Low
cufflinks 11.018        
cufflinks 9.915        
cufflinks 10.083     High  
cufflinks 4.351        
cufflinks 4.551        
cufflinks 8.372        
cufflinks 6.331        
cufflinks 6.355        
cufflinks 18.777     High High
cufflinks 11.5     High  
cufflinks 11.467     High  
cufflinks 11.637     High  
cufflinks 5.765        
cufflinks 2.032       Low
cufflinks 8.147        
cufflinks 6.552        
cufflinks 8.419        

0 Strain