Gene : Sobic.010G026300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10264:SF69 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 Genomic Order:  260
Name:  ? Sobic.010G026300 Secondary Identifier:  ? PAC:37909110
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G026300 0.5kb upstream 0.5kb upstream 3566   true Chr10: 2133950-2137515 Sorghum bicolor
Sobic.010G026300 0.5kb upstream 0.5kb upstream 500   false Chr10: 2137016-2137515 Sorghum bicolor
Sobic.010G026300 0.5kb downstream 0.5kb downstream 3566   true Chr10: 2133450-2137015 Sorghum bicolor
Sobic.010G026300 0.5kb downstream 0.5kb downstream 500   false Chr10: 2133450-2133949 Sorghum bicolor
Sobic.010G026300 1.0kb upstream 1.0kb upstream 4066   true Chr10: 2133950-2138015 Sorghum bicolor
Sobic.010G026300 1.0kb upstream 1.0kb upstream 1000   false Chr10: 2137016-2138015 Sorghum bicolor
Sobic.010G026300 1.0kb downstream 1.0kb downstream 4066   true Chr10: 2132950-2137015 Sorghum bicolor
Sobic.010G026300 1.0kb downstream 1.0kb downstream 1000   false Chr10: 2132950-2133949 Sorghum bicolor
Sobic.010G026300 2.0kb upstream 2.0kb upstream 5066   true Chr10: 2133950-2139015 Sorghum bicolor
Sobic.010G026300 2.0kb upstream 2.0kb upstream 2000   false Chr10: 2137016-2139015 Sorghum bicolor
Sobic.010G026300 2.0kb downstream 2.0kb downstream 5066   true Chr10: 2131950-2137015 Sorghum bicolor
Sobic.010G026300 2.0kb downstream 2.0kb downstream 2000   false Chr10: 2131950-2133949 Sorghum bicolor
Sobic.010G026300 5.0kb upstream 5.0kb upstream 8066   true Chr10: 2133950-2142015 Sorghum bicolor
Sobic.010G026300 5.0kb upstream 5.0kb upstream 5000   false Chr10: 2137016-2142015 Sorghum bicolor
Sobic.010G026300 5.0kb downstream 5.0kb downstream 8066   true Chr10: 2128950-2137015 Sorghum bicolor
Sobic.010G026300 5.0kb downstream 5.0kb downstream 5000   false Chr10: 2128950-2133949 Sorghum bicolor
Sobic.010G026300 10.0kb upstream 10.0kb upstream 13066   true Chr10: 2133950-2147015 Sorghum bicolor
Sobic.010G026300 10.0kb upstream 10.0kb upstream 10000   false Chr10: 2137016-2147015 Sorghum bicolor
Sobic.010G026300 10.0kb downstream 10.0kb downstream 13066   true Chr10: 2123950-2137015 Sorghum bicolor
Sobic.010G026300 10.0kb downstream 10.0kb downstream 10000   false Chr10: 2123950-2133949 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177417 5267 Panicoideae View MSA
124573931 5269 Grass View MSA
122047098 5273 Angiosperm View MSA
121346579 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.029        
cufflinks 4.357       Low
cufflinks 11.93     High  
cufflinks 15.463     High  
cufflinks 12.971     High  
cufflinks 10.508        
cufflinks 8.981        
cufflinks 4.526       Low
cufflinks 16.424     High High
cufflinks 14.1     High  
cufflinks 8.24        
cufflinks 11.032        
cufflinks 12.422     High  
cufflinks 12.798     High  
cufflinks 13.619     High  
cufflinks 8.921        
cufflinks 9.637        
cufflinks 9.115        
cufflinks 8.2        
cufflinks 15.56     High  
cufflinks 9.223        
cufflinks 9.155        
cufflinks 11.561     High  
cufflinks 9.756        
cufflinks 7.68        
cufflinks 3.792       Low
cufflinks 11.837     High  
cufflinks 70.107     High High
cufflinks 5.827       Low
cufflinks 14.036     High  

0 Strain