Gene : Sobic.009G234400 S. bicolor v3.1.1
Defline:  (1 of 2) K03251 - translation initiation factor 3 subunit D (EIF3D) Genomic Order:  2418
Name:  ? Sobic.009G234400 Secondary Identifier:  ? PAC:37922207
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G234400 0.5kb upstream 0.5kb upstream 2617 true Chr09: 57380742-57383358 Sorghum bicolor
Sobic.009G234400 0.5kb upstream 0.5kb upstream 500 false Chr09: 57382859-57383358 Sorghum bicolor
Sobic.009G234400 0.5kb downstream 0.5kb downstream 2617 true Chr09: 57380242-57382858 Sorghum bicolor
Sobic.009G234400 0.5kb downstream 0.5kb downstream 500 false Chr09: 57380242-57380741 Sorghum bicolor
Sobic.009G234400 1.0kb upstream 1.0kb upstream 3117 true Chr09: 57380742-57383858 Sorghum bicolor
Sobic.009G234400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 57382859-57383858 Sorghum bicolor
Sobic.009G234400 1.0kb downstream 1.0kb downstream 3117 true Chr09: 57379742-57382858 Sorghum bicolor
Sobic.009G234400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 57379742-57380741 Sorghum bicolor
Sobic.009G234400 2.0kb upstream 2.0kb upstream 4117 true Chr09: 57380742-57384858 Sorghum bicolor
Sobic.009G234400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 57382859-57384858 Sorghum bicolor
Sobic.009G234400 2.0kb downstream 2.0kb downstream 4117 true Chr09: 57378742-57382858 Sorghum bicolor
Sobic.009G234400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 57378742-57380741 Sorghum bicolor
Sobic.009G234400 5.0kb upstream 5.0kb upstream 7117 true Chr09: 57380742-57387858 Sorghum bicolor
Sobic.009G234400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 57382859-57387858 Sorghum bicolor
Sobic.009G234400 5.0kb downstream 5.0kb downstream 7117 true Chr09: 57375742-57382858 Sorghum bicolor
Sobic.009G234400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 57375742-57380741 Sorghum bicolor
Sobic.009G234400 10.0kb upstream 10.0kb upstream 12117 true Chr09: 57380742-57392858 Sorghum bicolor
Sobic.009G234400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 57382859-57392858 Sorghum bicolor
Sobic.009G234400 10.0kb downstream 10.0kb downstream 12117 true Chr09: 57370742-57382858 Sorghum bicolor
Sobic.009G234400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 57370742-57380741 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041522 5273 Angiosperm View MSA
122178035 5267 Panicoideae View MSA
124572558 5269 Grass View MSA
121344825 5274 Embryophyte View MSA
123426210 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.449     High High
cufflinks 3.402       Low
cufflinks 7.077       Low
cufflinks 13.543     High  
cufflinks 42.736     High  
cufflinks 15.479     High  
cufflinks 18.936     High  
cufflinks 5.081       Low
cufflinks 24.368     High  
cufflinks 25.135     High  
cufflinks 33.817     High  
cufflinks 29.983     High  
cufflinks 21.215     High  
cufflinks 36.955     High  
cufflinks 19.611     High  
cufflinks 8.409       Low
cufflinks 21.477     High  
cufflinks 21.484     High  
cufflinks 18.073     High  
cufflinks 25.647     High  
cufflinks 37.755     High  
cufflinks 46.924     High  
cufflinks 39.097     High  
cufflinks 43.451     High  
cufflinks 5.549       Low
cufflinks 2.592       Low
cufflinks 23.974     High  
cufflinks 34.827     High  
cufflinks 20.895     High  
cufflinks 30.155     High  

0 Strain