Gene : Sobic.009G233800 S. bicolor v3.1.1
Defline:  (1 of 1) PF04481 - Protein of unknown function (DUF561) (DUF561) Genomic Order:  2412
Name:  ? Sobic.009G233800 Secondary Identifier:  ? PAC:37922204
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G233800 0.5kb upstream 0.5kb upstream 4241 true Chr09: 57318186-57322426 Sorghum bicolor
Sobic.009G233800 0.5kb upstream 0.5kb upstream 500 false Chr09: 57321927-57322426 Sorghum bicolor
Sobic.009G233800 0.5kb downstream 0.5kb downstream 4241 true Chr09: 57317686-57321926 Sorghum bicolor
Sobic.009G233800 0.5kb downstream 0.5kb downstream 500 false Chr09: 57317686-57318185 Sorghum bicolor
Sobic.009G233800 1.0kb upstream 1.0kb upstream 4741 true Chr09: 57318186-57322926 Sorghum bicolor
Sobic.009G233800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 57321927-57322926 Sorghum bicolor
Sobic.009G233800 1.0kb downstream 1.0kb downstream 4741 true Chr09: 57317186-57321926 Sorghum bicolor
Sobic.009G233800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 57317186-57318185 Sorghum bicolor
Sobic.009G233800 2.0kb upstream 2.0kb upstream 5741 true Chr09: 57318186-57323926 Sorghum bicolor
Sobic.009G233800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 57321927-57323926 Sorghum bicolor
Sobic.009G233800 2.0kb downstream 2.0kb downstream 5741 true Chr09: 57316186-57321926 Sorghum bicolor
Sobic.009G233800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 57316186-57318185 Sorghum bicolor
Sobic.009G233800 5.0kb upstream 5.0kb upstream 8741 true Chr09: 57318186-57326926 Sorghum bicolor
Sobic.009G233800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 57321927-57326926 Sorghum bicolor
Sobic.009G233800 5.0kb downstream 5.0kb downstream 8741 true Chr09: 57313186-57321926 Sorghum bicolor
Sobic.009G233800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 57313186-57318185 Sorghum bicolor
Sobic.009G233800 10.0kb upstream 10.0kb upstream 13741 true Chr09: 57318186-57331926 Sorghum bicolor
Sobic.009G233800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 57321927-57331926 Sorghum bicolor
Sobic.009G233800 10.0kb downstream 10.0kb downstream 13741 true Chr09: 57308186-57321926 Sorghum bicolor
Sobic.009G233800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 57308186-57318185 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026778 5273 Angiosperm View MSA
122193096 5267 Panicoideae View MSA
124578223 5269 Grass View MSA
121348425 5274 Embryophyte View MSA
123380861 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.561        
cufflinks 4.276        
cufflinks 8.795        
cufflinks 8.11        
cufflinks 6.011        
cufflinks 13.592     High  
cufflinks 43.96     High High
cufflinks 37.339     High High
cufflinks 2.849        
cufflinks 2.617        
cufflinks 0.2       Low
cufflinks 0.289       Low
cufflinks 3.446        
cufflinks 0.197       Low
cufflinks 8.717        
cufflinks 7.337        
cufflinks 50.392     High High
cufflinks 65.143     High High
cufflinks 4.32        
cufflinks 12.291     High  
cufflinks 7.351        
cufflinks 0.166       Low
cufflinks 0.285       Low
cufflinks 0.379       Low
cufflinks 0.913        
cufflinks 3.083        
cufflinks 0.373       Low
cufflinks 3.23        
cufflinks 131.926     High High
cufflinks 11.495        

0 Strain